Gene Syncc9605_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1425 
Symbol 
ID3735962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1338894 
End bp1339976 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content64% 
IMG OID637776018 
Producthypothetical protein 
Protein accessionYP_381734 
Protein GI78212955 
COG category[S] Function unknown 
COG ID[COG2327] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03609] polysaccharide pyruvyl transferase CsaB 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0298954 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCCGCC CCACTGCGCC TGTATTGCTG CTTTGCGGCT ACTACGGAGA GCACAACCTC 
GGCGACGATG GCCTGCTTCA GGTCCTGGTC GCGTCACTTC CCCAGCCGCA GCAGCTTCTG
ATTACGGCCC GCGATCCGGC CCCTGTTTTG GCGTTGGCTC CGTCGGCGCA GACGGTGAAC
CGCCGTTCCT TGCTGCTCTG TCTTCGTGCG GCCCTGAGAG CTGATGTTCT TGTTCTTGGT
GGGGGGAGCC TGCTGCAGGA CAGCACCAGC TTCAGCAGCC TTGTCTATTA CCTGCTGGTG
ATGACGGTTG CCCGTTTAGG TGGCGCCGAG GTGGTTCTCT GGGGGCAGGG CCTTGGACCC
CTGCAGCGGC GGATCAGTCG GCTGTTGGTT CGCACGGTGT TGCCGCTCTG CAAGGCAGCG
AGCTGGAGGG ATCCGCGCTC CTTTGATTGG GCCCAGCGTT GGGCCCCCAA GCTGCCGATG
GTGCTGGCTG CCGATCCGGT CTGGCAGATG CCGGCGCGCC CTTGGCTCGG TGGCGACGCC
ATCGTGCTCA GTTGGCGTCC GACACCTTTG TTGGATCATG CGGGCTGGCG TCGCTTAACC
GAAGCCCTGG ATCGGCTCAG TGCCGACTTG GAGGCGCCGG TGATCTGGCT TGCGTTCCAT
CACCATCAGG ACGCGCCTCT GCTGCAGCAC CTGAGTGATC AAGGTCTGCT GCCGGCGCGA
TTGAAAGCGC GCAGCTCAAC CTTGTTTCCC CAGTCCCTTG AGGCTGTGTC CGATCTGGTG
CAGCGGGCGC GTCTGGTGCT GCCGATGCGG TTGCATGCCC TGATCCTGGC CCGACTGGCC
AACAGCCCCA TGGCTGCCCT CAGCTACGAC CCGAAGGTGG AGGCTGCAGC GGCCATGGCC
TCAGTGCCCT GCATTACCTT GCGGTCGCTT CCCTCTGTGG ATGATCTGCT GACCCTTTGG
CGGGCCGAAG TGGACCGTCC AGCGGATCCT GATCAGACCG AAGCTCTGCG ACGCCAGGCG
TCAGCGCACA GTGAGCTTCT CAATCGGATG GCGGACAACC TGACGGCAGA CGACGGCCGC
TGA
 
Protein sequence
MVRPTAPVLL LCGYYGEHNL GDDGLLQVLV ASLPQPQQLL ITARDPAPVL ALAPSAQTVN 
RRSLLLCLRA ALRADVLVLG GGSLLQDSTS FSSLVYYLLV MTVARLGGAE VVLWGQGLGP
LQRRISRLLV RTVLPLCKAA SWRDPRSFDW AQRWAPKLPM VLAADPVWQM PARPWLGGDA
IVLSWRPTPL LDHAGWRRLT EALDRLSADL EAPVIWLAFH HHQDAPLLQH LSDQGLLPAR
LKARSSTLFP QSLEAVSDLV QRARLVLPMR LHALILARLA NSPMAALSYD PKVEAAAAMA
SVPCITLRSL PSVDDLLTLW RAEVDRPADP DQTEALRRQA SAHSELLNRM ADNLTADDGR