Gene Syncc9605_1404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1404 
Symbol 
ID3737123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1318772 
End bp1320676 
Gene Length1905 bp 
Protein Length634 aa 
Translation table11 
GC content60% 
IMG OID637775997 
Productheat shock protein 90 
Protein accessionYP_381713 
Protein GI78212934 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0326] Molecular chaperone, HSP90 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.197773 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.898305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTGC TGGAGGAACA GGGTCAGATT CAGATCCACA CCGAAAACAT TTTCCCGATC 
ATCAAGAAGG CCGTTTATTC CGGCCACGAG GTGTTTCTTC GGGAGCTTGT GAGCAATGGC
GTCGACGCCA TCAGCAAGCG CCGCATGGCC GCCATGGCCG GCGACTGCAG CGAAGGGGAT
GACGGAGCCA TCCGGATCAC GGTGGATCGT GAGGCCAAGA CCGTCACCAT CAGCGACAAC
GGCATTGGCA TGACGGCCGA TGAGGTGAAG CGCTACATCA ACCAGGTGGC CTTCTCCAGT
GCCGAGGATT TCCTGGAGAA GTACAAGCAG GAAAACGACG CCATCATTGG CCACTTCGGG
CTGGGTTTCT ATTCCAGCTT CATGGTGGCC GAGCGGGTGG AGCTGCTGAC CCGTTCAGCC
CGGCCCGAGG CTGAGGCCGT GCGCTGGAGC TGTGATGGTT CCCCGAACTT CAGCCTCACT
GCCGCCGAAA AGGAGCAGCC CGGCACGGAC GTGATCCTTC ATCTGATGGA GGACGAGCTC
GAATATCTCG AACCGGCCCG GATCCGCACC CTGATCAACA CCTACTGCGA CTTCATGGCA
GTACCGGTGC AGCTGGGAGG GGAAACCATC AACAAGATGG ATGCCCCCTG GCGCAAAAGC
GCCCGAGATC TGAGTGATCA GGACTACATC GATCTCTATC ACTACCTGTA TCCCTTCCAG
GGCGACCCCC TGCTCTGGGT TCACCTCAAC ACCGACTATC CCTACAACCT TCAGGGCATT
CTTTTCTTCC CCAAGCAGAC CGGTCGTGCC GACTGGGAGA AAGGGGAAAT CAAGCTGTAC
TGCAACCAGG TGTTCGTCAG CGATTCGATC AAGGAGGTCG TTCCTCGCTA CCTGTTGCCC
CTGCGGGGAG TGATCGATTC ACCCGACATC CCCCTAAATG TGAGCCGCAG TGCCCTGCAG
ACCGACCGAC GCGTTCGCTC CATCGGCAAC TTCGTCGCCA AGAAGGTGTC CGACCGGCTG
CGGAACCTGA AAAAGGAGGA TCCCATGGGT TACGCCGAAG CCTGGGATGC CCTGGCACCC
TTCGTGAAGA TCGGCGCCAT GGAGGACGAA AAGTTCGCGG AGCAGGTGTC TGAAATGATC
CTGTTCGCCA CCACCGCAGC AGCAGTGGAA GGTAACGACG CTGACCCGAT CGCCTCCGAT
GGCCGTGCCT TCACCACCCT GGAGGGATAC CGCAGCCGAC TGTCCGCGGA TCAGAACAAG
CGCGTGCTCT ACAGCACCGA TGACGTCGCC CAGGCCGGAG CGCTCAACCT CTGGACTTCC
CAGGGCGCGG AAGTGCTGAA GCTGGAGACG GTGATCGACA CCCAGTTCAT CCCCTGGCTG
GAGCATCGCC ATGAGGAACT CACCTTCCAG CGCGTTGACT CTGAACTGGA CGAGAGCCTG
AAGGACAACG ATGCCGAGCT CACCGATCAG GACGGCACCA CGGAGTCAGA CCGACTGCGT
GATCTGATCA AAGGGGCCCT GGCCAATGAC AAGGTGACCG TTCAGGTGCA GGCCCTGAAA
GCCGAAGGAG CACCGCCGGC CTTGATTCTT CTGCCGGAGC AGATGCGCCG GCTGAACGAC
ATGGGCGCCT TGATGGAACA ACGGCTGCCA GGACTTCCCG AGCATCACGT GCTGCTGGTG
AACCGGCGTC ACCCCCTTGT GGAAGGGATG CTGAAGTTGC GTGCCGGTGG TGTGCTGGTG
GGAGCGGCGG AAACATCGCC GACCGCAAGC CTGTCCGAGG ATGTGGCCCG CCATCTGTAT
GACATGGCGC GCCTGGGCGT CGGGGGGCTG GAACCCAATG AACTGGCCGG TTTCCAGACC
CGCAGTGCTG AATTGATGGG TGCCTTGATG CAGAGAGGTC TTTGA
 
Protein sequence
MAVLEEQGQI QIHTENIFPI IKKAVYSGHE VFLRELVSNG VDAISKRRMA AMAGDCSEGD 
DGAIRITVDR EAKTVTISDN GIGMTADEVK RYINQVAFSS AEDFLEKYKQ ENDAIIGHFG
LGFYSSFMVA ERVELLTRSA RPEAEAVRWS CDGSPNFSLT AAEKEQPGTD VILHLMEDEL
EYLEPARIRT LINTYCDFMA VPVQLGGETI NKMDAPWRKS ARDLSDQDYI DLYHYLYPFQ
GDPLLWVHLN TDYPYNLQGI LFFPKQTGRA DWEKGEIKLY CNQVFVSDSI KEVVPRYLLP
LRGVIDSPDI PLNVSRSALQ TDRRVRSIGN FVAKKVSDRL RNLKKEDPMG YAEAWDALAP
FVKIGAMEDE KFAEQVSEMI LFATTAAAVE GNDADPIASD GRAFTTLEGY RSRLSADQNK
RVLYSTDDVA QAGALNLWTS QGAEVLKLET VIDTQFIPWL EHRHEELTFQ RVDSELDESL
KDNDAELTDQ DGTTESDRLR DLIKGALAND KVTVQVQALK AEGAPPALIL LPEQMRRLND
MGALMEQRLP GLPEHHVLLV NRRHPLVEGM LKLRAGGVLV GAAETSPTAS LSEDVARHLY
DMARLGVGGL EPNELAGFQT RSAELMGALM QRGL