Gene Syncc9605_1360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1360 
Symbol 
ID3736295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1275511 
End bp1276083 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content61% 
IMG OID637775952 
Producthypothetical protein 
Protein accessionYP_381669 
Protein GI78212890 
COG category[S] Function unknown 
COG ID[COG1981] Predicted membrane protein 
TIGRFAM ID[TIGR00701] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.905628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.269877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTTTT CGCCCGAGGC CTACCTCTGG TTCAAGACCC TGCACATCGT TGGGGTTGTG 
GTGTGGTTTG CGGGCCTCTT CTATCTGGTA CGCCTGTTCA TCTATCACGT TGAAACGGAG
GAACTGGCGC CGGAACTGCA GCAGCCGTTC CGTGATCAGT ACACCTTGAT GGAGAAACGC
CTCGCCAACA TCATCACTAC GCCGGGGATG GCTGTGGCGG TGTCGATGGC CATCGGGTTG
CTTCTGGCCC AGCCCTCCTG GCTTCAGCAG GGCTGGATGC ACGCCAAGCT CGGTTTTGTG
GCGGCCCTGC TGGCTTACCA CCTGTTCTGT TATCGGCTGA TGGGCCAACT TCACGCCGGC
ACCTGTGCCT GGTCGGGCAA GCAGCTGCGT GCCCTGAATG AGCTGCCGAC GTTGCTGCTG
GTGATCGTGG TGATGCTGGT GGTGTTCAAA ACGCAGTTCC CCACCAGCGC CGCGACCTGG
TTCATCGTCG CCCTGGTGGT GTTCATGGCA GCGTCAATTC AGTTCTATGC CCGCTGGCGC
CGCCTGCGGG CCGAAGCCTC CGCCAAAGCC TGA
 
Protein sequence
MTFSPEAYLW FKTLHIVGVV VWFAGLFYLV RLFIYHVETE ELAPELQQPF RDQYTLMEKR 
LANIITTPGM AVAVSMAIGL LLAQPSWLQQ GWMHAKLGFV AALLAYHLFC YRLMGQLHAG
TCAWSGKQLR ALNELPTLLL VIVVMLVVFK TQFPTSAATW FIVALVVFMA ASIQFYARWR
RLRAEASAKA