| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1327 |
|---|
| Symbol | |
|---|
| ID | 3736090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 1241978 |
|---|
| End bp | 1242469 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637775919 |
|---|
| Product | SpoU family tRNA/rRNA methyltransferase |
|---|
| Protein accession | YP_381636 |
|---|
| Protein GI | 78212857 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0219] Predicted rRNA methylase (SpoU class) |
|---|
| TIGRFAM ID | [TIGR00185] rRNA methylase, putative, group 2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0858796 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAGA TCTCACCCCT GCGGATCGCC CTGTTCGAGC CCCAGATTCC ACCGAACACC
GGCAATATCG CTCGCACCTC GGCGGCCTTC AGGATTCCGT TAACCCTGAT TGAGCCCCTT
GGCTTCAAGG TGGATGATCG CAGCGTGCGC CGTGCCGGCC TCGATTACTG GCCCCATGTG
CAGCTCTCGA TTGCTTCGAA CTTCCCTGAG TTTCAAGCCG GGCTTCGTCC AGGGCAGAGG
TTGATCGGCT GCAGCCGTCG CGGTGGCTCC TCGCTGACTT CGTTCACGTT CCAACGCGGC
GATGTGCTGC TGTTTGGCCG GGAAGACACG GGGCTTCCGG AATCGGTACG CGATGCCTGC
GACAGCATCC TCACGATCCC CATGCCTGGA GCAGCTGATG ACGCTGGCCA GGGAGGCGTG
CGCAGCCTCA ACCTTTCTGT GGCCTGCGCT CTGGTCACCT ATGTGGCTGG TCAGCAGTTG
CAGTTGTGGT GA
|
|---|
| Protein sequence | MTEISPLRIA LFEPQIPPNT GNIARTSAAF RIPLTLIEPL GFKVDDRSVR RAGLDYWPHV
QLSIASNFPE FQAGLRPGQR LIGCSRRGGS SLTSFTFQRG DVLLFGREDT GLPESVRDAC
DSILTIPMPG AADDAGQGGV RSLNLSVACA LVTYVAGQQL QLW
|
|---|
| |