| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1322 |
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| Symbol | |
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| ID | 3736084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 1235053 |
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| End bp | 1236849 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637775913 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_381631 |
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| Protein GI | 78212852 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.358408 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0936427 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCACCAG GTTCGAACTC CAGTGTTTCC GCGGCCCCTC AGAAGGCTCA ACCTTCCTCG
ATTCAGGGTT TTTGGACGAA GCAGGACAAG GTGAGTTACT CCACCCTGCT GAAGGACATC
GATGCGAAAG AGATCAAACA GTTGGATCTT GTGCCCGGTC AACGGGAGGT AAGAGTCCAA
TACAACGATG GCAGGCGGGT CACCGTTCCC GTTTTCGCCA ACGACAACCA AATCCTTCGG
GCTGCTGAGA GTTCCGGCAC GCCGCTGACG GTCGTTGACA TACGCCGCGA ACAGGCAGGA
CGAGAACTGG CGGGAACCCT GATGTTGGTG CTGCTGGTGG TGGTCGGCTT GTCGTTTCTG
TTGAAGCGTT CGGCTCAAAT GGCGAACAGA GCTCTAGGGT TTGGGCGCAG TCAACCTCGC
TTGAAACCCC AGCAAGATCT TCAGCTCCGT TTTGAGGACG TTGCCGGCAT TAACGATGCG
AGGCTTGAAC TTGAGGAGGT GGTCACGTTT CTCAAGCAGC CCGAGGCCTT CATCCGCCTG
GGCGCCAAGA TCCCTCGGGG CGTGCTGCTT GTGGGCCCCC CTGGTACCGG GAAAACTCTC
CTTGCCAAGG CGATTGCAGG AGAGGCGGGT GTGCCGTTCT TCTCCATCGC TGCCTCTGAG
TTTGTTGAGC TGTTCGTGGG TGTTGGTGCG AGCAGGGTTC GCGATCTGTT CCGCCAAGCC
AAGGAAAAGT CCCCCTGCAT CGTTTTCATT GACGAGATCG ATGCGGTCGG TCGTCAACGC
GGGGCTGGCA TCGGCGGCGG CAATGATGAA CGAGAGCAGA CCCTCAACCA ACTCCTGACG
GAGATGGACG GTTTTGAGGA GAACTCCGGT GTGATCCTCC TGGCGGCTAC AAATCGCGCC
GACGTGCTCG ACGCCGCACT GTTGCGTCCA GGACGCTTCG ATCGGCGCAT TGATGTGGGC
CTTCCCGATC GCCGAGGTCG CGAGGCCATT CTCGCCGTGC ATGCGAGAAC TCGACCCCTT
GATGACGCGG TTTCGCTGTC GGATTGGGCG AGCCGCACCC CGGGGTTTTC AGGGGCTGAC
CTCGCCAATC TCCTCAACGA AGCGGCCATC CTCACGGCCC GCCAGAACAT GCTCCGGATC
GGTGAATTTC AACTGGAGGG AGCCCTGGAG CGGATCACCA TGGGCCTGAG CAATCGCCCC
TTGCAGGACA GCGCCAAGAA ACGGCTCATC GCCTATCACG AAGTTGGCCA TGCTCTGGTG
GCAAGTTTGC TGCCGGCTGC CAACGCAGTG GACAAAGTCA CGATTCTTCC CCGTGGGGGT
GCCGGTGGTT ACACCCGCTT CATGCCCGAC GAGGAGGTGC TGGATTCCGG GTTGATCACG
CGGTCGTCCT GCCTGGCTGA CCTGGTTGTC GCCCTTGGTG GACGGGCCGC TGAGCAGGTG
GTGTTTGGAT CGCTTGAAAT CACCCAGGGC GCCAGTGGCG ATCTCCAGAT GGTGGCGCAA
CTCGCACGGG AGATGGTGAC GCGTTTTGGC TTTTCCAACC TCGGCCCCAT GGCACTGGAG
GGTCCCGGCA CGGAGGTGTT TCTGGGGCGC GATTGGTTCA ATCAGCGGCC GGGCTATGCC
GAATCCACAG GTCAGGCCAT TGATTCTCAA ATACGCCAGC TCGCCAAAAA CGCTCTTGCA
GAAGCCATTG CCCTTCTGGA GCCCCGCCGC GAGTTGATGG ATCAATTGGT GGACGTTTTG
ATCGCTGAGG AAACGATCGA CGGTGATCGG TTCCGAGACA TCGCTGGCCT TCCATGA
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| Protein sequence | MAPGSNSSVS AAPQKAQPSS IQGFWTKQDK VSYSTLLKDI DAKEIKQLDL VPGQREVRVQ
YNDGRRVTVP VFANDNQILR AAESSGTPLT VVDIRREQAG RELAGTLMLV LLVVVGLSFL
LKRSAQMANR ALGFGRSQPR LKPQQDLQLR FEDVAGINDA RLELEEVVTF LKQPEAFIRL
GAKIPRGVLL VGPPGTGKTL LAKAIAGEAG VPFFSIAASE FVELFVGVGA SRVRDLFRQA
KEKSPCIVFI DEIDAVGRQR GAGIGGGNDE REQTLNQLLT EMDGFEENSG VILLAATNRA
DVLDAALLRP GRFDRRIDVG LPDRRGREAI LAVHARTRPL DDAVSLSDWA SRTPGFSGAD
LANLLNEAAI LTARQNMLRI GEFQLEGALE RITMGLSNRP LQDSAKKRLI AYHEVGHALV
ASLLPAANAV DKVTILPRGG AGGYTRFMPD EEVLDSGLIT RSSCLADLVV ALGGRAAEQV
VFGSLEITQG ASGDLQMVAQ LAREMVTRFG FSNLGPMALE GPGTEVFLGR DWFNQRPGYA
ESTGQAIDSQ IRQLAKNALA EAIALLEPRR ELMDQLVDVL IAEETIDGDR FRDIAGLP
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