Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1285 |
Symbol | |
ID | 3737228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 1200422 |
End bp | 1201153 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637775875 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_381594 |
Protein GI | 78212815 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGAAC GCCGGCGCTT GCTTCTGTCG CCGGATCGCC TGGAGCAGGG TGGATCGGTT CTGCTCAATA CCGAAGAGCA GCACTACCTG CGGAGAGTGT TGCGTCTGCG CTGCGGCGAG CAGGTGGATG TGATCGATGG CTGCGGCCGC CTCACTCGCG CAACCCTGAT GGAGCCGCAG ATGCTTGGGC TCGACAGTTC AGTGCAGAAC ATTGAACCCT CGCCAAAACC TCAGCTGGGC CTGGCCGTGG CCTTGATGCG GCGGGGGATG GATGAGGTGG TCCGAATGGC CTGTGAGCTT GGGATTGATC GGATCCAGCC CCTGCGCTGC GATCGCTGTG TTCCCCAAGC CGACCACCGA CCCGAGCGCT GGGCCACGAT CATTCGTGAG GCGGTGGAGC AGTGCGAGCG GTTATGGATA CCGCAGCTGC ATGAGGTGAA CGGTTTATCC GAATGGATTG GAGAACAGGA CGGTCTGCGT TTTGCAGGGG TCACACGCGA GTCGGTCGCT CCATCGTTGG ATCAATGTTT GCGCCAACAG GGGAATGCAA GCCAGACCAT TTGGGTGGTG ATCGGTCCTG AGGGGGGATG GACCTCAGCA GAACAAAATC TCTTTGCCGA AGCGGGGGTC CGGCCTGTGC GGATGGGAGC AACCATCCTG CGCAGTTCGA CAGCAGCGGT GGCAAGCGCG GTGGAACTGG TGCGTTGGCG CGATGGCCTG ATCAGCTCTT GA
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Protein sequence | MAERRRLLLS PDRLEQGGSV LLNTEEQHYL RRVLRLRCGE QVDVIDGCGR LTRATLMEPQ MLGLDSSVQN IEPSPKPQLG LAVALMRRGM DEVVRMACEL GIDRIQPLRC DRCVPQADHR PERWATIIRE AVEQCERLWI PQLHEVNGLS EWIGEQDGLR FAGVTRESVA PSLDQCLRQQ GNASQTIWVV IGPEGGWTSA EQNLFAEAGV RPVRMGATIL RSSTAAVASA VELVRWRDGL ISS
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