Gene Syncc9605_1285 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1285 
Symbol 
ID3737228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1200422 
End bp1201153 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content62% 
IMG OID637775875 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_381594 
Protein GI78212815 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTGAAC GCCGGCGCTT GCTTCTGTCG CCGGATCGCC TGGAGCAGGG TGGATCGGTT 
CTGCTCAATA CCGAAGAGCA GCACTACCTG CGGAGAGTGT TGCGTCTGCG CTGCGGCGAG
CAGGTGGATG TGATCGATGG CTGCGGCCGC CTCACTCGCG CAACCCTGAT GGAGCCGCAG
ATGCTTGGGC TCGACAGTTC AGTGCAGAAC ATTGAACCCT CGCCAAAACC TCAGCTGGGC
CTGGCCGTGG CCTTGATGCG GCGGGGGATG GATGAGGTGG TCCGAATGGC CTGTGAGCTT
GGGATTGATC GGATCCAGCC CCTGCGCTGC GATCGCTGTG TTCCCCAAGC CGACCACCGA
CCCGAGCGCT GGGCCACGAT CATTCGTGAG GCGGTGGAGC AGTGCGAGCG GTTATGGATA
CCGCAGCTGC ATGAGGTGAA CGGTTTATCC GAATGGATTG GAGAACAGGA CGGTCTGCGT
TTTGCAGGGG TCACACGCGA GTCGGTCGCT CCATCGTTGG ATCAATGTTT GCGCCAACAG
GGGAATGCAA GCCAGACCAT TTGGGTGGTG ATCGGTCCTG AGGGGGGATG GACCTCAGCA
GAACAAAATC TCTTTGCCGA AGCGGGGGTC CGGCCTGTGC GGATGGGAGC AACCATCCTG
CGCAGTTCGA CAGCAGCGGT GGCAAGCGCG GTGGAACTGG TGCGTTGGCG CGATGGCCTG
ATCAGCTCTT GA
 
Protein sequence
MAERRRLLLS PDRLEQGGSV LLNTEEQHYL RRVLRLRCGE QVDVIDGCGR LTRATLMEPQ 
MLGLDSSVQN IEPSPKPQLG LAVALMRRGM DEVVRMACEL GIDRIQPLRC DRCVPQADHR
PERWATIIRE AVEQCERLWI PQLHEVNGLS EWIGEQDGLR FAGVTRESVA PSLDQCLRQQ
GNASQTIWVV IGPEGGWTSA EQNLFAEAGV RPVRMGATIL RSSTAAVASA VELVRWRDGL
ISS