Gene Syncc9605_1268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1268 
Symbol 
ID3736011 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1186650 
End bp1187636 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content58% 
IMG OID637775858 
Productchlorophyll synthase / NADPH-protochlorophyllide oxidoreductase 
Protein accessionYP_381578 
Protein GI78212799 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID[TIGR01289] light-dependent protochlorophyllide reductase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTTCAA GCTCCATGAC GACGGCTAAA AAGCGCCGCG TTCTGATCAC CGGTGCCAGC 
AGCGGTATTG GCCTTGAAGC GGCAAAGATC CTGCTGGCCC GCGGTGATGC AATCACCGTT
GTTTGCCGCA ATGCAGAACG AGCCGAACGA ACCCGCAAGG CTCTTTCGGA TTCCGTGGAG
ACGTGTATCG CCGACCTGGC TGACCTTGCG TCCGTCGCCA GAGCGATTGA AGAACTCTGC
TGTGACGGGA CGCCATTCGA TGCACTGGTG CTAAATGCTG GGTTGCAATA CGCCGGCCAT
GACTCCCCCC GCTGGAGCGC ACAGGGCATT GAACTCACTT TTGCGGTGAA CCACCTGGCC
CATCAACTGT TGGCTGAAGA ATTAAAAGAG CAAACCCGTG CCCTGGTGAT CACCGCCTCT
GAGGTGCACA ACCCAACCAC GGGCGGAGGA CGGGTTGGGA AGCCTGCCGG CCTCGGCATG
CTGAAGGGAC TGCGCCAGGG TCCCGGGGCC CCGATGGTGG ATGGAGAAAG TCCGTTCAAT
GCAGACAAGG CCTACAAAGA CAGCAAGCTC TGCAATCTGC TGATGGCCCT GCAGATCCAC
CGACAACGTC CTGAGCTGCC TGTCGTGGCC TGGAGTCCAG GGCTTGTGAT TCCACGGATG
ACAGGGGGAT TTTTCAGGAA CAGTCGCCAA GCCAATCCCC TGGGGCAAGC CTTGTTCGGA
TTGATCGCCC GGGATCTTTT GCGATTGACG GAAAACGTTG AGCGGGCTGG GGAACTGCTG
GTGCAGCTCA TCGATGAACA GCTTCACCAG CCGGGATTCA GCTACTGGAG CAATGCGCTG
CTGGGCCCTG GCCGGCATCA ATTCAAACCA ACGGAACCCT CCGAGGAAGC AACTGACAGC
GACAAATCGA CGATGCTCTG GATGTTGTCG AACGATCTGA TCAACGCATC ACTGGGGCCA
TCAAACCATC GGCAGCAGGG GCAGTAA
 
Protein sequence
MCSSSMTTAK KRRVLITGAS SGIGLEAAKI LLARGDAITV VCRNAERAER TRKALSDSVE 
TCIADLADLA SVARAIEELC CDGTPFDALV LNAGLQYAGH DSPRWSAQGI ELTFAVNHLA
HQLLAEELKE QTRALVITAS EVHNPTTGGG RVGKPAGLGM LKGLRQGPGA PMVDGESPFN
ADKAYKDSKL CNLLMALQIH RQRPELPVVA WSPGLVIPRM TGGFFRNSRQ ANPLGQALFG
LIARDLLRLT ENVERAGELL VQLIDEQLHQ PGFSYWSNAL LGPGRHQFKP TEPSEEATDS
DKSTMLWMLS NDLINASLGP SNHRQQGQ