| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1260 |
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| Symbol | |
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| ID | 3736464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 1180350 |
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| End bp | 1182023 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637775850 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_381570 |
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| Protein GI | 78212791 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.77083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.952172 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCGCT CCGACGCCGT CACCAAGGGG ATCCAGCGGT CTCCCAACCG CGCCATGTTG
CGGGCCGTGG GCTTTGGAGA CAGTGATTTC GGCAAGCCCA TCCTGGGCAT TGCCAACGGC
TACAGCACTA TCACCCCCTG CAATATCGGG CTGAACGACC TGGCCAAACG GGCTGAGGAA
GCAGCCCGCC AGGCCGGAGG CATGCCCCAG ATGTTTGGAA CCATCACCGT GAGTGATGGA
ATCTCCATGG GCACTGAAGG GATGAAGTAC TCCCTGGTGA GCCGTGAAGT GATTGCTGAC
GCCATCGAAA CGGCCTGCAA CGGTCAGAGC ATGGATGGGG TGCTGGCCGT TGGTGGCTGC
GACAAGAACA TGCCTGGCGC CATGCTGGCC ATGGCTCGGA TGAACATTCC TTCGGTTTTC
GTCTACGGCG GCACGATCAA GCCGGGCAAG CTCGGGGGCT GTGATCTCAC GGTGGTGAGC
GCTTTTGAGG CGGTGGGGCA ACTCACCAGC GGCAAGATCG ACGAAGTGCA GCTCACCGCA
GTTGAGAAAA ATGCCTGCCC TGGGGCTGGC AGTTGCGGCG GCATGTTCAC CGCCAACACC
ATGAGTGCCG CCATCGAAAC GATGGGGCTG AGCCTTCCCT ACAGCTCCAC GATGGCAGCC
GAGGACGAGG AAAAGGCCGA CAGTGCCGCT CGCTCCGCTG AGGTGCTGGT GGAGGCAGTG
AAAGCCAACA TTCGCCCTCT GGACCTGCTC ACCAAGGAAG CCTTTGAGAA CGCCATTAGC
GTGATCATGG CGGTGGGTGG CTCCACCAAT GCGGTACTGC ACCTGCTGGC CATTGCCCGT
ACCGCCGGCG TCGACCTGAG CATCGATGAC TTCGAACGGA TCCGTCAGCG GGTGCCGGTG
ATCTGTGATC TCAAGCCCAG CGGCCGCTAC GTGACCGTTG ATCTGCACAA CGCCGGCGGC
ATTCCCCAGG TGATGAAGCT GCTGCTGGAT GCTGGCTTGC TGCACAGCGA CTGCCGAACC
GTGGAAGGCA AAAGCCTGAA GGAGTTGCTG GCCGATGTGC CGTCGGAGCC CCCCGCCGGG
CAGGAGGTGA TCCGCCCCCT CAGCAATCCG CTGTACGCCA AAGGTCACCT CGCCATCCTT
AAGGGCAACC TCGCCAGCGA GGGAAGCGTG GCCAAGATCA GCGGCGTGAA AACCCCTGTG
CTCACTGGCC CTGCGCGGGT GTTTGAAAGC GAGGAAGACT GCCTTGCCGC CATCCTCGAT
AAAAAGATCC AGGCCGGGGA TGTGGTGGTG GTCCGCAACG AGGGTCCCGT TGGTGGACCG
GGCATGCGGG AAATGCTGGC TCCAACTTCA GCGATTGTTG GTCAGGGCCT GGGGGACAAG
GTCGCCCTGA TCACCGATGG CCGCTTTAGC GGCGGCACCT ATGGCCTGGT GGTGGGTCAT
GTGGCTCCTG AAGCTGCTGT TGGTGGAACG ATCGGCCTGG TGCAAGAAGG CGACAGCATC
ACGGTTGATG CTGATCAGCT GCTGCTCCAA CTCAACGTGG ATCAAGCGGA ACTGGATCGC
CGTCGTGCGG GATGGAGCAA GCCGGAACCG CGTTACCGCA GCGGAATTCT CGGCAAGTAC
GCGCGGCTCG TCTCCAGCTC AAGCCGGGGT GCAACCACCG ACCACGCCGA CTGA
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| Protein sequence | MLRSDAVTKG IQRSPNRAML RAVGFGDSDF GKPILGIANG YSTITPCNIG LNDLAKRAEE
AARQAGGMPQ MFGTITVSDG ISMGTEGMKY SLVSREVIAD AIETACNGQS MDGVLAVGGC
DKNMPGAMLA MARMNIPSVF VYGGTIKPGK LGGCDLTVVS AFEAVGQLTS GKIDEVQLTA
VEKNACPGAG SCGGMFTANT MSAAIETMGL SLPYSSTMAA EDEEKADSAA RSAEVLVEAV
KANIRPLDLL TKEAFENAIS VIMAVGGSTN AVLHLLAIAR TAGVDLSIDD FERIRQRVPV
ICDLKPSGRY VTVDLHNAGG IPQVMKLLLD AGLLHSDCRT VEGKSLKELL ADVPSEPPAG
QEVIRPLSNP LYAKGHLAIL KGNLASEGSV AKISGVKTPV LTGPARVFES EEDCLAAILD
KKIQAGDVVV VRNEGPVGGP GMREMLAPTS AIVGQGLGDK VALITDGRFS GGTYGLVVGH
VAPEAAVGGT IGLVQEGDSI TVDADQLLLQ LNVDQAELDR RRAGWSKPEP RYRSGILGKY
ARLVSSSSRG ATTDHAD
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