Gene Syncc9605_1241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1241 
Symbol 
ID3735834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1161421 
End bp1162173 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content61% 
IMG OID637775831 
Productputative carboxypeptidase 
Protein accessionYP_381551 
Protein GI78212772 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1876] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.747447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTTCGGG CCTCCTCTGC GCGACGCACC GAGCGGGAGG ACATTCCGGT CGCCCGTCGA 
ACACGACAGC CGCGACAACG CAAGGGAAAT AGCGCGGCTG GTCTGCTGTT CGGGCTTGTT
CTTGTCTGTG CCGGAAGCCT TGCAGTGGTG ATGCTGGTTC CCACCCTGCT GTCACAGCGC
CAGCCCACGC AGAGCCTCGA GATTTCAGGC TTTCGAGAAC GTCCCGACGC CGACGGCCGT
CTCCTGGGTC ACTTCCCCTA TGACGAAGCG GATGCCGATC AACTCATCGT CTTTGAGCCA
GGGATTGAGC TGAATGTGGA GGCCGCCGAT GCCCTCGACA CGATGATGCG ATACGCCTCG
GCTGACGGGG TTGATCTGCG TCTGCTCAGC GGATTTCGTT CCCTGGCCCT CCAGGAATCG
ATCTTTTTTG ACGTGGCCTC CGAACGGAAC CAAACCGCCG AAGAACGAGC TCAGGTTTCG
GCTCCACCCG GCTACTCCGA GCACAGCACC GGTTATGCCG TGGATCTCGG CGATGGCCGT
TTTCCTGAGA CCAACCTCTC CCAGAGCTTT CAAGACACCG CAGCCTTTCG CTGGTTGCAG
GACCATGCGG CCCGGTATCA CTTCGTGTTG TCCTTTCCCG AAGGCAACAA ACAGGGTGTG
ATGTACGAAC CCTGGCATTG GCGCTACCAG GGCAATGCGG ACGCACTGCG TTTGTTCGAG
CCGGCCAGTC GGTTCTCCAG GCGCGACCCT TGA
 
Protein sequence
MVRASSARRT EREDIPVARR TRQPRQRKGN SAAGLLFGLV LVCAGSLAVV MLVPTLLSQR 
QPTQSLEISG FRERPDADGR LLGHFPYDEA DADQLIVFEP GIELNVEAAD ALDTMMRYAS
ADGVDLRLLS GFRSLALQES IFFDVASERN QTAEERAQVS APPGYSEHST GYAVDLGDGR
FPETNLSQSF QDTAAFRWLQ DHAARYHFVL SFPEGNKQGV MYEPWHWRYQ GNADALRLFE
PASRFSRRDP