Gene Syncc9605_1226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1226 
Symbol 
ID3735819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1145761 
End bp1146462 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content63% 
IMG OID637775816 
Productputative D-alanyl-D-alanine dipeptidase 
Protein accessionYP_381536 
Protein GI78212757 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2173] D-alanyl-D-alanine dipeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.101046 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.395432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCCCT GGAGCCCGAT TCCCATCGCA GAGTGCGGCG AGCCGATGCA AGAGCTGCCT 
CCAGCTTTGT TGCGGATGGA GCCTCATCCG TACATGGCGC TTGGGGCGCC CTATGGGGCA
TCGGGGACTC CCTTCCAACT GCGCCTGGGG GTGGTTCAGC GCCTGCTTGA CGCCCAGCAG
CAGCTGATTG AGCACGATCC CAGTCTGCGC CTGAGCATTT TTGATGCTTA TCGGCCGATT
GCCGTGCAGG CCTTCATGGT GGATCACAGC ATTGCCGAAC TCTGCCGTGA ACGCGGTGTT
GAAGTGCGCT CGGGGGACGC CTTTGATCAG GTGGTGGCCG ATGTGGGGCG GTTCTGGGCA
GCTCCCAGTC GGGACCCCAT GACACCGCCA CCCCACAGCA CCGGTGCTGC TATCGACCTC
ACCCTCAGCA GCAGCGATGG AACGCCTTTG GCCATGGGGG GAGAGATTGA TGCCATTGGT
GCGGTGTCTG AACCGCAGCA CTACGCCGGT CGGGACGACT CGAATGCTCG GCGCTGGCAT
CAACGCCGGC AGTTGCTGGC TGAAGTAATG GGAGCAGCAG GGTTTGCCCA GCATCCCAAC
GAGTGGTGGC ACTACTCGTT CGGAGATCAG CTCTGGGCCT GGCGAAGGGG TGCCGCTTTG
GCGATCTACG CCGAGGCCGT CAACAGCGCG CTCACTTCCT GA
 
Protein sequence
MRPWSPIPIA ECGEPMQELP PALLRMEPHP YMALGAPYGA SGTPFQLRLG VVQRLLDAQQ 
QLIEHDPSLR LSIFDAYRPI AVQAFMVDHS IAELCRERGV EVRSGDAFDQ VVADVGRFWA
APSRDPMTPP PHSTGAAIDL TLSSSDGTPL AMGGEIDAIG AVSEPQHYAG RDDSNARRWH
QRRQLLAEVM GAAGFAQHPN EWWHYSFGDQ LWAWRRGAAL AIYAEAVNSA LTS