Gene Syncc9605_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1223 
Symboltsf 
ID3737014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1141480 
End bp1142142 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content59% 
IMG OID637775813 
Productelongation factor Ts 
Protein accessionYP_381533 
Protein GI78212754 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0264] Translation elongation factor Ts 
TIGRFAM ID[TIGR00116] translation elongation factor Ts 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.310853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCTG CCGTATCCGC CAAGCTTGTC AAAGAACTGC GCGACAAGAC CGGCGCGGGG 
ATGATGGATT GCAAAAAGGC CCTGGCCGCC ACGGAAGGCG ATGCCAACAA GGCCGTTGAG
TGGCTTCGCC AGAAAGGCAT CGCCAGCGCT GAAAAGAAAT CAGGTCGCAC CGCCGCCGAG
GGTGCCATCG GCAGCTACAT CCACACCGGT GCCCGCGTCG GAGTTCTGGT TGAGGTGAAC
TGCGAAACCG ATTTCGTGGC CCGGGGCGAC ATGTTCCAGT CGCTTCTGCG TGATGTCTCC
ATGCAGGTGG CGGCATGCCC CAACGTGGAG TACGTCACCA CCGATGAAAT CCCCAACGAG
ATCCGTGAGC GGGAAAAGGC GATCGAAATG GGCCGTGACG ATCTCGAGGG CAAGCCTGAG
CAGATGAAGG AAAAGATCGT TGAAGGTCGC ATTGGCAAGC GCCTCAAGGA ACTCGCCCTC
ATGGAGCAAC CTTTCATCAA GGACAGCTCC ATCACTGTTG CTGACCTCGT GAAGCAAACC
GCCGGCAAGA TCGGCGAGAA CGTGAAAGTT CGTCGCTTCA CCCGTTACAC CCTGGGCGAG
GGCATCGAGG TGGAAGAGAA CGATTTCGCT GCTGAAGTGG CGTCCATGCA GAACGCCGGC
TGA
 
Protein sequence
MAAAVSAKLV KELRDKTGAG MMDCKKALAA TEGDANKAVE WLRQKGIASA EKKSGRTAAE 
GAIGSYIHTG ARVGVLVEVN CETDFVARGD MFQSLLRDVS MQVAACPNVE YVTTDEIPNE
IREREKAIEM GRDDLEGKPE QMKEKIVEGR IGKRLKELAL MEQPFIKDSS ITVADLVKQT
AGKIGENVKV RRFTRYTLGE GIEVEENDFA AEVASMQNAG