Gene Syncc9605_1221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1221 
Symbol 
ID3737012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1139616 
End bp1140548 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content60% 
IMG OID637775811 
Productglycosyltransferase 
Protein accessionYP_381531 
Protein GI78212752 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.628351 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.475099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGTCA GCGTCGTTAT TCCGACCTAC AACCGACGCC CGATCCTTGA GAAATGCCTT 
TCGGCACTGG AAGATCAGCA GCTTGCTGGA GCTCTTCAGG ACTACGAGGT TGTTGTGGTC
GACGACGGGT CCACCGATGG AACGCCGTCA TGGCTGAGTG AGCAGGCCCA TCGTTTTCCC
CATGTGCGCC TGTTTGAGCA GGAGCACGGT GGCCCTGCAG AGGGCCGGAA CCGAGGCGTG
GACCACGCCC GTGGCGATGT GATCGTCTTC ATCGACAGCG ACCTGGTGGT CACAGAAACC
TTCCTGGCTA CCCATGCACG GGCGTTGAAG CAGTGCTGGC AACGGCGCGG TGATCGGCTC
TGCTTCACCT ATGGCGCGGT CATCAACACC GCCAACTTCG AAGCACCCTG CTCGGAACGC
CACAAATTAC GTGACTTGTC CTGGGCTTAT TTCGCCACCG GCAATGTGGC CATCGATCGG
GAGGTGCTGG AGCGTTCAGG CCTGTTTGAC ACTGGTTTCC GCCTTTATGG CTGGGAAGAC
TTGGAACTCG GTGAGCGTCT GCGGCGGATG GGGGTTGAGT TGGTCAAGTG TCCGGACGCG
GTCGGTTACC ACTGGCACCC AGCCCTGAGT CTCAACCAGA TCCCCCGTCT TGTGGAAGTG
GAGGGAGAAC GGGCGCGTAT GGGGCTTGTC TTCTACCGCA AGCATCCAAC CAGGCGGGTG
CGGTTGATCA TTCAGTTCAC CTGGTTCCAC CGCATCCTTT GGGAAGTGCT CACCCTCTGT
GGGCTGATCA ATCCCTCCAG CCTTCGCCCG CTGCTCCGCT GGCTGATTCG GCACGGCTAT
CCAGGAACGG CGATGGAGCT GCTTCGTTTG CCCCTCAACC GCATCGGTGT GCGTGCCCTG
TTCCACGAAG CCAGAGCGGC CGGACTTCGC TGA
 
Protein sequence
MFVSVVIPTY NRRPILEKCL SALEDQQLAG ALQDYEVVVV DDGSTDGTPS WLSEQAHRFP 
HVRLFEQEHG GPAEGRNRGV DHARGDVIVF IDSDLVVTET FLATHARALK QCWQRRGDRL
CFTYGAVINT ANFEAPCSER HKLRDLSWAY FATGNVAIDR EVLERSGLFD TGFRLYGWED
LELGERLRRM GVELVKCPDA VGYHWHPALS LNQIPRLVEV EGERARMGLV FYRKHPTRRV
RLIIQFTWFH RILWEVLTLC GLINPSSLRP LLRWLIRHGY PGTAMELLRL PLNRIGVRAL
FHEARAAGLR