Gene Syncc9605_1206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1206 
Symbol 
ID3736997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1126472 
End bp1126996 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content61% 
IMG OID637775796 
Productphycobilisome core component-allophycocyanin beta-18 subunit 
Protein accessionYP_381516 
Protein GI78212737 
COG category 
COG ID 
TIGRFAM ID[TIGR01337] allophycocyanin, beta subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.74383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGATG CAATCAGCGG TCTGATCGGT CGCTACGACC AGCTGGGTCG TTACTTCGAT 
CGTCCAGCCA TCGACAGCAT CAATGCGTAT CTGGATGAAT CCGCGCTGCG GATTCAGGCC
GTTGAGCTGA TCAACGGTTC CTCGGCCGAG ATTGTGCGTG AGGCCAGCCA GCGCCTGTTC
CGGGATGAAC CCGACCTGCT GCTGCCCGGT GGCAACGCCT ACACCACTCG CCGGCTCGCC
GCCTGCCTGC GGGATATGGA TTACTTCCTC CGTTACGCCA GTTACGCCCT GGTGGCCGGT
GACTCCACAA TCCTCAATGA GCGTGTACTG AACGGGCTCG ACGACACCTA TAAAAGCCTG
GGGGTTCCCA CCGGCCCAAC GGTCCGCAGC ATAGTTCTGT TGGGAGAGGT TGTTTCCGAG
ATGCTTCTGG CCAAAGGCGC TGCGTCCGAT CAGCTCGCCA CCGTTCTTCA GCCGTTCGAC
CATCTGGCCA AGGGGCTCGG CGAAACCAAC GTGCGCCAAC GCTGA
 
Protein sequence
MRDAISGLIG RYDQLGRYFD RPAIDSINAY LDESALRIQA VELINGSSAE IVREASQRLF 
RDEPDLLLPG GNAYTTRRLA ACLRDMDYFL RYASYALVAG DSTILNERVL NGLDDTYKSL
GVPTGPTVRS IVLLGEVVSE MLLAKGAASD QLATVLQPFD HLAKGLGETN VRQR