Gene Syncc9605_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1179 
Symbol 
ID3736918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1107185 
End bp1107616 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content66% 
IMG OID637775769 
Productputative SOS mutagenesis protein UmuD 
Protein accessionYP_381489 
Protein GI78212710 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.482422 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCTCC AACACAGACC GCTTCCCCTG CAGCCCAAGC GCAGTCGGCT CACGCTGCCC 
CTGGCTGGGG AACGCGTCGC CGCTGGCTTC CCGTCCCCAG CCGATGACTA CGTCGACGTG
GGGATCGACC TCAATGAACA GCTGATCCGG CATCCCACCA GCACCTTTTT CCTGCATGTG
AGCGGCGAAT CGATGACCGA CGCCGGCATC CACGACGGCG ATCTTCTGGT GGTCGATCGC
AGCCTCGACC CGCGCCCGGG CCAGGTGGTT GTGGCTGTGC TCGACGGTGC CTTCACCCTC
AAACGCCTGA TGCATCATCG CGGCCGGTTG CGCCTGGAAG CCGCCCATCC GGACTATCCG
CCACTGGAGC TTCACCGCTG CGGCGAAGTG CAGATCTGGG GCGTCGCCAT CCACGTGATC
CATCCGCTCT GA
 
Protein sequence
MELQHRPLPL QPKRSRLTLP LAGERVAAGF PSPADDYVDV GIDLNEQLIR HPTSTFFLHV 
SGESMTDAGI HDGDLLVVDR SLDPRPGQVV VAVLDGAFTL KRLMHHRGRL RLEAAHPDYP
PLELHRCGEV QIWGVAIHVI HPL