Gene Syncc9605_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1162 
Symbol 
ID3735620 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1093864 
End bp1094208 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content43% 
IMG OID637775752 
Productputative monovalent cation/H+ antiporter subunit C 
Protein accessionYP_381472 
Protein GI78212693 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1006] Multisubunit Na+/H+ antiporter, MnhC subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.660845 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.977203 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTGA CGCCCGAGAA AATAAGGCTA TTCCCGATCG TCTTGCTGAT GATCATTGGT 
TGCTTTGGTT TACTCAATTC AAAATCAATT TTACGTTCGC TTCTTTCGCT TGATGTGATT
GATACGGCCA CCATAACTAT TTTTGTACTT ATTGCTGCCT CCTCTGGTTA TCAGACGCCC
ATCGTTTCCA CACAACGATA CAGCGCTTAT TCAGATCCAT ATCCGCAAGC CATTATTTTG
ACTGCAATTG TTATTGGTTT TGCCACCCAA GCTTTGCTTT GTTCGGTAGC ACTTCGCCTC
GGTAGAAAAT CGCCAATGCT TCGCTACAGA GATCTTGAAA AATAA
 
Protein sequence
MELTPEKIRL FPIVLLMIIG CFGLLNSKSI LRSLLSLDVI DTATITIFVL IAASSGYQTP 
IVSTQRYSAY SDPYPQAIIL TAIVIGFATQ ALLCSVALRL GRKSPMLRYR DLEK