| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1158 |
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| Symbol | dnaE |
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| ID | 3735616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 1088792 |
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| End bp | 1092310 |
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| Gene Length | 3519 bp |
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| Protein Length | 1172 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637775748 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_381468 |
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| Protein GI | 78212689 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.304661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.960715 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTCG TTCCTCTCCA CAACCACAGC GACTACAGCC TTCTCGATGG CGCGTCGCAG
TTGCCGGCCA TGGTGGAGGA GGCGAAACAG CTGGGCATGC CTGCCATCGC CCTGACAGAT
CACGGCGTGA TGTACGGCGC GATTGAGTTG CTGAAGCTCT GTCAGGGAAC AGATCTCAAG
CCGATCATCG GCAACGAGAT GTATGTGATC AACGGGTCCA TTGACGATCC GCAACCCAAG
AAAGAGAAGC GATATCACCT GGTGGTGCTG GCCAAAAATG CCACCGGTTA CCGCAACTTG
GTGAAGCTCA CCAGCATCAG CCACCTGCGG GGAATGCGGG GACGCGGGAT CTTCTCCCGT
GCCTGCATCG ACAAGGAGCT GCTGAAGCAA CACAGTGAAG GCCTGATCAT CGCCACGGCC
TGCCTCGGAG GCGAGATTGC CCAGGCGATT CTGCGGGGTC GCCCCGATGT GGCACGCAAG
GTGGCGGCTT GGTATCAGGA GGTCTTCGGC GACGACTACT ACCTCGAGAT CCAGGACCAC
GGATCTCCTG AGGATCGGAT CGTCAACGTG GAGATCGTCA AAATTGCCAA GGAACTCGGC
ATTCAGATCG TTGCGACCAA CGATGCCCAC TACCTGAGCA AGCAGGACGT TGAAGCCCAC
GATGCCTTGC TCTGCGTGCT CACCGGCAAG TTGATCACCG ATGAGAAGCG GCTGCGTTAC
ACCGGCACCG AATACATCAA AACCGAAGAG GAGATGGGCC TTCTCTTCGG GGATCACCTC
GAGCCTGAGG TGGTTCAGGA AGCGATCGCC AACACCGTCA AGGTGGCCGA GAAGGTGGAG
CCTTACGACA TCCTTGGCCG CTATCAAATG CCCCGCTTCC CCATCCCCGA GGGCCACACC
CCCGTCAGCT ACCTGCGTGA GGTGACGGAG CAGGGATTGC GGGATCGGCT CGAGCTCAGT
CCTGAGGCTT CCTTGCCCGA CGACTACGCC GAGCGCATGG CCCATGAGCT CAAGATCATG
GAGCAGATGG GATTCCCCAC CTACTTCCTG GTGGTCTGGG ATTACATCCG TTTTGCACGG
GAACAGAACA TTCCCGTCGG TCCGGGTCGT GGCTCCGCCG CAGGGTCGCT TGTCGCGTAC
TGCCTGGGAA TCACCAACAT TGATCCGATC ACCAACTGCC TGCTGTTCGA GCGCTTCCTC
AATCCGGAAC GCAAGTCGAT GCCTGATATA GACACTGACT TCTGCATCGA GCGTCGTGGT
GAGGTGATCG ACTACGTCAC TGAGCGCTAC GGCGAGGACA AGGTGGCCCA GATCATCACC
TTCAACCGGA TGACGTCAAA GGCGGTTTTG AAGGATGTGG CCAGGGTGCT CGACATTCCC
TACGGCGATG CCGACCGTCT GGCGAAGCTG ATCCCGGTGG TTCGCGGCAA GCCCGCGAAG
CTCAAGGCGA TGATCGGTGA GGAATCCCCC AACCCCGAGT TTCGCGAGAA ATACGAGGCG
GATCCAACGG TGAAGCGTTG GGTGGACATG GCGATGCGGA TTGAAGGTAC CAACAAAACC
TTCGGTGTTC ACGCAGCTGG TGTGGTCATC GCTGCTGACC CCCTCGACGA ACTGGTGCCG
TTGCAGCGCA ACAACGATGG TCAGGTGATC ACGCAGTACT TCATGGAAGA CGTGGAATCC
ATGGGTCTGT TGAAGATGGA TTTCCTGGGG TTGAAGAACC TCACGATGAT CGAAAAGACC
CTCGAACTGG TGGAGGTCAG CAGTGGCACC CGTGTCGATC CCGACAAACT GCCGCCCCAG
GATGAAGCGA CCTTTGCACT TCTGGCGAGA GGTGATCTGG AGGGGATCTT CCAGTTGGAA
TCCAGCGGAA TGCGGCAGAT CGTGCGTGAT CTCAAGCCGT CATCCCTGGA AGACATCTCC
TCGATTCTTG CCCTCTACAG ACCGGGTCCC CTCGATGCTG GCCTGATTCC CAAATTCATC
AACCGTAAGC ACGGCCGGGA GGCGATCGAC TTCGCCCACG CGATTCTTGA GCCGATCCTG
TCCGAGACCT ACGGGATCAT GGTGTATCAG GAACAGATCA TGCGGATCGC GCAGGATCTG
GCCGGCTACT CCCTGGGTCA GGCCGACCTG CTCCGGCGGG CGATGGGCAA GAAAAAAGTA
TCCGAGATGC AGAAGCACCG CGGCATCTTC GTTCAGGGTG CTGGAGAGCG CGGCGTTGAT
GAAAAGGTCG CCGACGAACT GTTCGACCAG ATGGTTCTCT TCGCTGAATA TTGCTTTAAC
AAGAGCCATT CCACGGCCTA TGGAGCCGTC ACGTATCAGA CGGCTTACCT GAAGGCGCAC
TACCCGGTCG CTTATATGGC GGCCCTGCTT ACGGTGAATG CCGGAGCTGC CGACAAGGTG
CAGCGCTACA TCTCCAATTG CAATGCGATG GGCATTGAGG TGATGCCTCC GGATGTGAAT
GCCTCACTCA CCGATTTCAC TCCCAATGGC GATCGGATCC TGTTCGGACT CTCCGCCGTT
CGCAACCTTG GTGATGGTGC GATCCGTCAA TTGATTGCTG CCCGCGATAG CGATGGACCC
TTCCGCTCTC TGGCGGATCT GTGCGACCGG ATTCCGTCCT CGGTGCTCAA CCGTCGTGGT
CTGGAGTCGT TGGTTCACTG CGGTGCCCTG GATGCCATGG ATCCGCAGGC CAACCGTGCT
CAGTTGATGG CTGATCTGGA TCTGCTGCTC GACTGGGCCT CCTCACGGGC CAAAGACCGA
GACAGCGGCC AGGGCAACCT CTTTGATCTG ATGGCTCCTG CCGCCGATGC CGATGGGCCG
GCGGATCTCA GCCATGCACC CAAGGCGGCA CCGGTGACGG ACTATCCCCC AACGGAGAAG
CTTCGTCTCG AAAAAGATCT AGTGGGATTC TACCTGTCCG ATCACCCGCT CAAACAGCTC
ACACCCTCTT CGAAGTTGCT GGCGCCCATT GGTTTGGGCT CTCTGGAAGA ACAGCCAGAC
AAAGCCAAGG TGAGTGCCAT TGCGATGGTG GCTGAAATGC GCCAAGTCAC CACACGCAAG
GGCGATCGCA TGGCGATCCT GCAGCTCGAG GATCTCACCG GAAGTTGCGA GGCTGTGGTG
TTTCCCAAGA GCTACGCCCG CCTTGCGGAT CACCTGATGG CTGAGGCCCG CCTCCTGGTT
TGGGCTGGCG TCGATCGGCG TGACGAGCGC GTCCAGCTGA TCATCGACGA CTGCCGCGCC
GTTGATGAGC TCAATCTGCT GCTAGTTCAG CTCCCCTCTG ATCAGGCCAG CGACATCGCC
ATCCAGCACA AGCTGAGGGA ATGCCTCAAC CAACATCGCC CCGAGCGGGA TGAGCTGGGC
GTGAAGGTGC CTGTCGTCGC CGAGGTGTGG CACGGCGATA GCGTTCGCTA TGTGCGACTC
GGCTCCCAGT TCTGCGTCAA GGACGTTGAT GCAGCGATTG CTTCACTGCG AACCCATTCC
TTTGCAGCCC GAAGCAGCGA CCGCCTGGTG CTCTCCTGA
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| Protein sequence | MAFVPLHNHS DYSLLDGASQ LPAMVEEAKQ LGMPAIALTD HGVMYGAIEL LKLCQGTDLK
PIIGNEMYVI NGSIDDPQPK KEKRYHLVVL AKNATGYRNL VKLTSISHLR GMRGRGIFSR
ACIDKELLKQ HSEGLIIATA CLGGEIAQAI LRGRPDVARK VAAWYQEVFG DDYYLEIQDH
GSPEDRIVNV EIVKIAKELG IQIVATNDAH YLSKQDVEAH DALLCVLTGK LITDEKRLRY
TGTEYIKTEE EMGLLFGDHL EPEVVQEAIA NTVKVAEKVE PYDILGRYQM PRFPIPEGHT
PVSYLREVTE QGLRDRLELS PEASLPDDYA ERMAHELKIM EQMGFPTYFL VVWDYIRFAR
EQNIPVGPGR GSAAGSLVAY CLGITNIDPI TNCLLFERFL NPERKSMPDI DTDFCIERRG
EVIDYVTERY GEDKVAQIIT FNRMTSKAVL KDVARVLDIP YGDADRLAKL IPVVRGKPAK
LKAMIGEESP NPEFREKYEA DPTVKRWVDM AMRIEGTNKT FGVHAAGVVI AADPLDELVP
LQRNNDGQVI TQYFMEDVES MGLLKMDFLG LKNLTMIEKT LELVEVSSGT RVDPDKLPPQ
DEATFALLAR GDLEGIFQLE SSGMRQIVRD LKPSSLEDIS SILALYRPGP LDAGLIPKFI
NRKHGREAID FAHAILEPIL SETYGIMVYQ EQIMRIAQDL AGYSLGQADL LRRAMGKKKV
SEMQKHRGIF VQGAGERGVD EKVADELFDQ MVLFAEYCFN KSHSTAYGAV TYQTAYLKAH
YPVAYMAALL TVNAGAADKV QRYISNCNAM GIEVMPPDVN ASLTDFTPNG DRILFGLSAV
RNLGDGAIRQ LIAARDSDGP FRSLADLCDR IPSSVLNRRG LESLVHCGAL DAMDPQANRA
QLMADLDLLL DWASSRAKDR DSGQGNLFDL MAPAADADGP ADLSHAPKAA PVTDYPPTEK
LRLEKDLVGF YLSDHPLKQL TPSSKLLAPI GLGSLEEQPD KAKVSAIAMV AEMRQVTTRK
GDRMAILQLE DLTGSCEAVV FPKSYARLAD HLMAEARLLV WAGVDRRDER VQLIIDDCRA
VDELNLLLVQ LPSDQASDIA IQHKLRECLN QHRPERDELG VKVPVVAEVW HGDSVRYVRL
GSQFCVKDVD AAIASLRTHS FAARSSDRLV LS
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