| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1148 |
|---|
| Symbol | |
|---|
| ID | 3735606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 1078716 |
|---|
| End bp | 1079429 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637775738 |
|---|
| Product | peptide methionine sulfoxide reductase |
|---|
| Protein accession | YP_381458 |
|---|
| Protein GI | 78212679 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0225] Peptide methionine sulfoxide reductase |
|---|
| TIGRFAM ID | [TIGR00401] methionine-S-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0553207 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCCTT CCTGGCTGTC TCCCCGCGGC GGCGCCGAAT CATCTGCACC GGCAACACAC
GCCGTGTTGG GAACGCCGCT GAAAGCCCCA CTGATGGCCG ACCAGGAGGA AGCAATCTTT
GCCTGTGGGT GCTTCTGGGG CGCTGAAAAA GGATTTTGGC GACTCCCAGG GGTGGTGAGC
ACCGCCGTGG GCTACGCGGG CGGCCAGACC GAGCAACCGA CCTACAACCA GGTCTGCTCC
GGCAGAACGG GACACACCGA AGTGGTGCGT GTGGTGTGGA GCCGGCCCGC TCTCGACTTC
AGCGACCTGC TGAAACTGTT CTGGGAGTGC CACGACCCCA CCCAGGGCAA CCGGCAGGGC
AACGACACAG GCAGCCAATA CCGATCGGCC ATCTACACGT TCAATCCGGA GCATCTGCAA
CTGGCCCTGG CCAGCCGAGA TGCTTATCAA GTCGCTCTTT CGGCCAAGGG CTACGGAGCC
ATCACCACCG AAATCCTGGC GGACCAAACC TTCTATTTCG CCGAGGATTA CCACCAGCAG
TACCTGGCCA AACCGGGCAG CCGCCCCTAT TGCTCCGCCA TGCCGACCCA GACGCTCCTG
GGGGAATTCG AAGGATCGAA CTACAAACTG CCTAAGCAGG TTTGGGACAA ATACGACTGG
TCCATCAACC ACTGCGTGCT TCGATCCGAC AACAGCCCAA TCGCGATCGG CTGA
|
|---|
| Protein sequence | MLPSWLSPRG GAESSAPATH AVLGTPLKAP LMADQEEAIF ACGCFWGAEK GFWRLPGVVS
TAVGYAGGQT EQPTYNQVCS GRTGHTEVVR VVWSRPALDF SDLLKLFWEC HDPTQGNRQG
NDTGSQYRSA IYTFNPEHLQ LALASRDAYQ VALSAKGYGA ITTEILADQT FYFAEDYHQQ
YLAKPGSRPY CSAMPTQTLL GEFEGSNYKL PKQVWDKYDW SINHCVLRSD NSPIAIG
|
|---|
| |