Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1138 |
Symbol | |
ID | 3735903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 1069735 |
End bp | 1070385 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637775727 |
Product | HAD family hydrolase |
Protein accession | YP_381448 |
Protein GI | 78212669 |
COG category | [R] General function prediction only |
COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACTGC CACCTGCCGC TTGCCTGTTC GATCTGGATG GACTCTTGCT CGACACCGAG CCGCTGCATG GCCGTGGCTG GAGCGAAGCC GCGGCCCACT TCGGCACCCA GCTGAGTGAG GCTCAGTTGA TGCAGCTGAA GGGCCGTCGC CGACTCGACT GTGCGGCCCA GGTGAATGCA TGGCTGGCGG AACCGGTGGG CACGGATGCC CTGTTGGCGG TGCAACAGCC GATCGTTCGT GCCCTGCTTC CGGATGCTGC CCCGATGCCT GCCGCCCAAG AGCTGGTGAC GCATTGCCAC AACCGGAACA TCCCCATGGC GCTGGTCACC AGCAGCAGCC GCGACGCGGT TGAATTCAAA GCAGCTCCCC ATCCCTGGCT TGAGCAGATC CAGGAACGGG TCTACGGCGA CGATCCCGAC CTTGATGCGG GCAAACCCGA CCCTGCACCC TTCCGGCTTG CCGCCCAACG CTTGGGCCTT CACCCCAACC ACTGCTGGGC CCTGGAGGAT TCCCAGGCCG GCTGCCAATC AGCCCATGGC GCCGGCTGTC AGGTCTGGCT GGTGAGCCCC AAGGGATCAG ACCAAGCCAA CTTGAACACC AACCCCTGTT CCATCAACAG CCTGGCTGTT GTGTTGAGGC TGTTGTCTTG A
|
Protein sequence | MKLPPAACLF DLDGLLLDTE PLHGRGWSEA AAHFGTQLSE AQLMQLKGRR RLDCAAQVNA WLAEPVGTDA LLAVQQPIVR ALLPDAAPMP AAQELVTHCH NRNIPMALVT SSSRDAVEFK AAPHPWLEQI QERVYGDDPD LDAGKPDPAP FRLAAQRLGL HPNHCWALED SQAGCQSAHG AGCQVWLVSP KGSDQANLNT NPCSINSLAV VLRLLS
|
| |