Gene Syncc9605_1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1138 
Symbol 
ID3735903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1069735 
End bp1070385 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content64% 
IMG OID637775727 
ProductHAD family hydrolase 
Protein accessionYP_381448 
Protein GI78212669 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTGC CACCTGCCGC TTGCCTGTTC GATCTGGATG GACTCTTGCT CGACACCGAG 
CCGCTGCATG GCCGTGGCTG GAGCGAAGCC GCGGCCCACT TCGGCACCCA GCTGAGTGAG
GCTCAGTTGA TGCAGCTGAA GGGCCGTCGC CGACTCGACT GTGCGGCCCA GGTGAATGCA
TGGCTGGCGG AACCGGTGGG CACGGATGCC CTGTTGGCGG TGCAACAGCC GATCGTTCGT
GCCCTGCTTC CGGATGCTGC CCCGATGCCT GCCGCCCAAG AGCTGGTGAC GCATTGCCAC
AACCGGAACA TCCCCATGGC GCTGGTCACC AGCAGCAGCC GCGACGCGGT TGAATTCAAA
GCAGCTCCCC ATCCCTGGCT TGAGCAGATC CAGGAACGGG TCTACGGCGA CGATCCCGAC
CTTGATGCGG GCAAACCCGA CCCTGCACCC TTCCGGCTTG CCGCCCAACG CTTGGGCCTT
CACCCCAACC ACTGCTGGGC CCTGGAGGAT TCCCAGGCCG GCTGCCAATC AGCCCATGGC
GCCGGCTGTC AGGTCTGGCT GGTGAGCCCC AAGGGATCAG ACCAAGCCAA CTTGAACACC
AACCCCTGTT CCATCAACAG CCTGGCTGTT GTGTTGAGGC TGTTGTCTTG A
 
Protein sequence
MKLPPAACLF DLDGLLLDTE PLHGRGWSEA AAHFGTQLSE AQLMQLKGRR RLDCAAQVNA 
WLAEPVGTDA LLAVQQPIVR ALLPDAAPMP AAQELVTHCH NRNIPMALVT SSSRDAVEFK
AAPHPWLEQI QERVYGDDPD LDAGKPDPAP FRLAAQRLGL HPNHCWALED SQAGCQSAHG
AGCQVWLVSP KGSDQANLNT NPCSINSLAV VLRLLS