Gene Syncc9605_1135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1135 
Symbol 
ID3735900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1066828 
End bp1067922 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content66% 
IMG OID637775724 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_381445 
Protein GI78212666 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0223149 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTCCGG CGTCGTCTCG ACGGCTGGCC TGGCTTCTGG CCGCGGCCCT GCAGTGCACT 
GCCTTCACCC AGGCATTGCC TGCCCGAGCC GCCAGTGCCT TGGCCGCCTG GGCTTTCACC
GAGCAGGGGG TCCTCAAGCT GCGCACCAGC CGGAATGCTC GTTTGGAGGC GTTCTTTCAG
GCCGCCAGCG ATGGCCGCGG CACCAGGGTC TGGATTGATA TCCCTGGTGA GCTGAGGTTC
CCGCGTCGCC TGGCCGGACG GGGTGCAGTC CGTGAGATCC GGCTGGGCAA ACCCCGTGCC
GGTGCCACCC GTCTGGTGGT GGAATTCCGC CCTGATGTGG ATCTCAACCC CAACGATCTG
CGCCTGCGTG GAACCGCTCC GGATCGCTGG GAACTGGTGT TTACCGGCCT GCCCACCCGC
GGCTTGGATG ATTTCGGTGA AGGCGATCTC ACCGGTCGTG CCACGGCCTG GCTCCCACCC
GGTGGATTTC GTCCTACCCG TACACCGGTG GATCCTTCCG GATTGCCAAC GGTGGCCCGC
AATCGCTACC GCATCGTCAT CGACCCCGGT CATGGAGGCC CTGATCCTGG GGCTATCGGC
ATTCGCGGTC TGCGAGAGAC CGACGTGGTT CTGGATGTGT CGCTGCAGGT GGCTGATCTG
CTTCGGGCCA GGGGCGTGGA CGTGCGCTTG ACCCGCACGC GGGAGGTGGA TGTGGACCTG
CCGCCGCGGG TGTCCCTGGC AAATCGCAGC GGGGCCACTG CTTTCGTGAG CATCCATGCC
AATGCCCTGA GCATGAACCG TCCGGATGTG AACGGGATCG AGACGTTCTT CTTCTCGGAC
CCCCGTTCTG GACGCCTGGC GTCCTATCTG CAGCAGCAGA TGATGGATGT GTCCCCCGGA
ACACCGAATC GCGGCGTCAG ACGCGGCCGC TTCTTCGTGA TCCGGCGCAG CACCATGCCT
TCGGCTCTGG TGGAGATGGG ATTTGTCACC GGGGCGATTG ACGCGCCGCG GCTGGCCAAC
GCTGACCATC GCCGCCGCCT GGCCTTGGCC CTGGCGGCCG GCATCCTCAA CTATCTGAAG
CAGGAGGTGC GATGA
 
Protein sequence
MVPASSRRLA WLLAAALQCT AFTQALPARA ASALAAWAFT EQGVLKLRTS RNARLEAFFQ 
AASDGRGTRV WIDIPGELRF PRRLAGRGAV REIRLGKPRA GATRLVVEFR PDVDLNPNDL
RLRGTAPDRW ELVFTGLPTR GLDDFGEGDL TGRATAWLPP GGFRPTRTPV DPSGLPTVAR
NRYRIVIDPG HGGPDPGAIG IRGLRETDVV LDVSLQVADL LRARGVDVRL TRTREVDVDL
PPRVSLANRS GATAFVSIHA NALSMNRPDV NGIETFFFSD PRSGRLASYL QQQMMDVSPG
TPNRGVRRGR FFVIRRSTMP SALVEMGFVT GAIDAPRLAN ADHRRRLALA LAAGILNYLK
QEVR