Gene Syncc9605_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1122 
Symbol 
ID3735675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1053126 
End bp1054811 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content67% 
IMG OID637775713 
Product2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 
Protein accessionYP_381434 
Protein GI78212655 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 
TIGRFAM ID[TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.727681 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAGGCCG CCCTCACGCT GCTGGAGGCT CTATGTCTCC AGGGTCTGAA GCAGCTGGTA 
CTCTGCCCTG GCAGCCGTTC CGGTCCCCTG GCAACAGCGG CGGGCGTGCT GGCATCCCAG
GCGAAGCTGC AGTTGGTCAC GGCCATCGAC GAGCGCTCGG CCGCGTTTCT GGCCCTCGGC
ATGGCAACCG CCCATGGCCG TGTCGTGGCA GTGGTCACCA CCTCTGGCAC CGCGGTGTCC
AATCTGCTGC CCGCTGCGGT GGAGGCGGAC CGCTCCTGTC AGCCCTTGCT GCTGCTCACG
GCGGATCGCC CCGTCCGGCT CAAAAACTGC GGCGCCAACC AGACGGTTAA TCAGGAATCT
TTTCTGCTCG CGGCCTGCCG CTGGTTCGGC AGTGGTGCGG CAGACGGCAT CCACACGCAG
GCCAACGACG CCCTCAATGC CCTGGCAGTT AAGGCCTGGC AGCAAGCCCA GGGTGCAGGT
ACTGGGCCGC CGGGAGCGGT TCACCTCAAC CTGCCCTTTG AGGAGCCGCT GCACACCACG
CTCGAGCAGC AACAACAGCT GGCTTCGGCT GCGCTCCCGC CCACGGCTTG CCCTGAGCCT
TCGCCCGGGA TCGGGCCTGC GCTTCGCCTC GATCCAGAGC GCCCGGGGGT TGTAGTTGCG
GGCCCGTGGC GTGGGCTCAC GCTTTCCTTG GAGGCCCATC AACAGGCGTT GCATCGCTGG
CTGAACCTCA GCGGTTGGCC TCTGCTGGCC GATCCCCTTG CCGCCCTGCC CCCCGATTGC
CCCAACCGCA TCGAGCACTG GGAGCTGCAG CTCGATCGGC TGAGCCTGCC TGACGACGCT
CAGGTGTTGC GGCTGGGACC GATGCCCGCC AGCCGGCGGC TGGAGGCTTG GCTTCAGCGC
CATCAGGGCC CCCAGCTGTT GATCACCGAA GGGGATCCAA GGCCGCTGGA TCCGCTGCAT
ACCGCCAATC AATGGTCGGG GGGCATGGCC GCCTGGATCG CTCAACAGCC TGGTCTGAAA
CAGGCGACCA AACCATCTGT TGGCACCAAT GATCTGTCGC CGTGGCTTGA GACCCAGCTG
CCCCTGCGTG GCGCCGTCAC TGAGCCTGCT CTGGCCTACT GGCTCCCCCA GCTGCTTCCG
GAGCAGTTGC CGGTGATGCT GGCCGCCAGT TCACCGGTGC GCGACTGGTT GACCTGGGGC
GGGTACTCCT GCGGCCGCCA CCGTTGCTTC AGCTTCCGTG GGGCCTCGGG CATCGACGGC
ACTTTGTCGC TCGCCATGGG TCTGGCGGCG AATCTCGGTC CGTTGGCGCT GGTGACCGGT
GATCTGGCCC TGCTGCACGA CAGCAACGGT TGGCTGCATG CATCGTCCGC TGCCGCACCT
CCACCTCTGC TGGTGCTGCT GATCGACAAC GGCGGCGGCG GCATTTTTCA GCAGCTGCCC
ATTGCCACAC CGGGCTTCGA ATCGCTCTTC GCCATGCCCC AGCAGGTGGA CTCCCTGGCC
CTGGCGGCAG CCCATGGTGT GCCTGGTCGC CAGGTGGCCT GTCTGGAGGA TCTGCAGGAG
GCCTTGGCCT GGGGCTTGTC GCAGCAACGG CCGGTGTTGT TGCGATTGTG CAGCGACCGC
GGTCGTGATG CTGTCCTGCG TCAGCAGTTG CGCGCTGCTG CTCAGAATGA GGGCACTGAG
CTCTGA
 
Protein sequence
MQAALTLLEA LCLQGLKQLV LCPGSRSGPL ATAAGVLASQ AKLQLVTAID ERSAAFLALG 
MATAHGRVVA VVTTSGTAVS NLLPAAVEAD RSCQPLLLLT ADRPVRLKNC GANQTVNQES
FLLAACRWFG SGAADGIHTQ ANDALNALAV KAWQQAQGAG TGPPGAVHLN LPFEEPLHTT
LEQQQQLASA ALPPTACPEP SPGIGPALRL DPERPGVVVA GPWRGLTLSL EAHQQALHRW
LNLSGWPLLA DPLAALPPDC PNRIEHWELQ LDRLSLPDDA QVLRLGPMPA SRRLEAWLQR
HQGPQLLITE GDPRPLDPLH TANQWSGGMA AWIAQQPGLK QATKPSVGTN DLSPWLETQL
PLRGAVTEPA LAYWLPQLLP EQLPVMLAAS SPVRDWLTWG GYSCGRHRCF SFRGASGIDG
TLSLAMGLAA NLGPLALVTG DLALLHDSNG WLHASSAAAP PPLLVLLIDN GGGGIFQQLP
IATPGFESLF AMPQQVDSLA LAAAHGVPGR QVACLEDLQE ALAWGLSQQR PVLLRLCSDR
GRDAVLRQQL RAAAQNEGTE L