Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_1122 |
Symbol | |
ID | 3735675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 1053126 |
End bp | 1054811 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637775713 |
Product | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase |
Protein accession | YP_381434 |
Protein GI | 78212655 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.727681 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCAGGCCG CCCTCACGCT GCTGGAGGCT CTATGTCTCC AGGGTCTGAA GCAGCTGGTA CTCTGCCCTG GCAGCCGTTC CGGTCCCCTG GCAACAGCGG CGGGCGTGCT GGCATCCCAG GCGAAGCTGC AGTTGGTCAC GGCCATCGAC GAGCGCTCGG CCGCGTTTCT GGCCCTCGGC ATGGCAACCG CCCATGGCCG TGTCGTGGCA GTGGTCACCA CCTCTGGCAC CGCGGTGTCC AATCTGCTGC CCGCTGCGGT GGAGGCGGAC CGCTCCTGTC AGCCCTTGCT GCTGCTCACG GCGGATCGCC CCGTCCGGCT CAAAAACTGC GGCGCCAACC AGACGGTTAA TCAGGAATCT TTTCTGCTCG CGGCCTGCCG CTGGTTCGGC AGTGGTGCGG CAGACGGCAT CCACACGCAG GCCAACGACG CCCTCAATGC CCTGGCAGTT AAGGCCTGGC AGCAAGCCCA GGGTGCAGGT ACTGGGCCGC CGGGAGCGGT TCACCTCAAC CTGCCCTTTG AGGAGCCGCT GCACACCACG CTCGAGCAGC AACAACAGCT GGCTTCGGCT GCGCTCCCGC CCACGGCTTG CCCTGAGCCT TCGCCCGGGA TCGGGCCTGC GCTTCGCCTC GATCCAGAGC GCCCGGGGGT TGTAGTTGCG GGCCCGTGGC GTGGGCTCAC GCTTTCCTTG GAGGCCCATC AACAGGCGTT GCATCGCTGG CTGAACCTCA GCGGTTGGCC TCTGCTGGCC GATCCCCTTG CCGCCCTGCC CCCCGATTGC CCCAACCGCA TCGAGCACTG GGAGCTGCAG CTCGATCGGC TGAGCCTGCC TGACGACGCT CAGGTGTTGC GGCTGGGACC GATGCCCGCC AGCCGGCGGC TGGAGGCTTG GCTTCAGCGC CATCAGGGCC CCCAGCTGTT GATCACCGAA GGGGATCCAA GGCCGCTGGA TCCGCTGCAT ACCGCCAATC AATGGTCGGG GGGCATGGCC GCCTGGATCG CTCAACAGCC TGGTCTGAAA CAGGCGACCA AACCATCTGT TGGCACCAAT GATCTGTCGC CGTGGCTTGA GACCCAGCTG CCCCTGCGTG GCGCCGTCAC TGAGCCTGCT CTGGCCTACT GGCTCCCCCA GCTGCTTCCG GAGCAGTTGC CGGTGATGCT GGCCGCCAGT TCACCGGTGC GCGACTGGTT GACCTGGGGC GGGTACTCCT GCGGCCGCCA CCGTTGCTTC AGCTTCCGTG GGGCCTCGGG CATCGACGGC ACTTTGTCGC TCGCCATGGG TCTGGCGGCG AATCTCGGTC CGTTGGCGCT GGTGACCGGT GATCTGGCCC TGCTGCACGA CAGCAACGGT TGGCTGCATG CATCGTCCGC TGCCGCACCT CCACCTCTGC TGGTGCTGCT GATCGACAAC GGCGGCGGCG GCATTTTTCA GCAGCTGCCC ATTGCCACAC CGGGCTTCGA ATCGCTCTTC GCCATGCCCC AGCAGGTGGA CTCCCTGGCC CTGGCGGCAG CCCATGGTGT GCCTGGTCGC CAGGTGGCCT GTCTGGAGGA TCTGCAGGAG GCCTTGGCCT GGGGCTTGTC GCAGCAACGG CCGGTGTTGT TGCGATTGTG CAGCGACCGC GGTCGTGATG CTGTCCTGCG TCAGCAGTTG CGCGCTGCTG CTCAGAATGA GGGCACTGAG CTCTGA
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Protein sequence | MQAALTLLEA LCLQGLKQLV LCPGSRSGPL ATAAGVLASQ AKLQLVTAID ERSAAFLALG MATAHGRVVA VVTTSGTAVS NLLPAAVEAD RSCQPLLLLT ADRPVRLKNC GANQTVNQES FLLAACRWFG SGAADGIHTQ ANDALNALAV KAWQQAQGAG TGPPGAVHLN LPFEEPLHTT LEQQQQLASA ALPPTACPEP SPGIGPALRL DPERPGVVVA GPWRGLTLSL EAHQQALHRW LNLSGWPLLA DPLAALPPDC PNRIEHWELQ LDRLSLPDDA QVLRLGPMPA SRRLEAWLQR HQGPQLLITE GDPRPLDPLH TANQWSGGMA AWIAQQPGLK QATKPSVGTN DLSPWLETQL PLRGAVTEPA LAYWLPQLLP EQLPVMLAAS SPVRDWLTWG GYSCGRHRCF SFRGASGIDG TLSLAMGLAA NLGPLALVTG DLALLHDSNG WLHASSAAAP PPLLVLLIDN GGGGIFQQLP IATPGFESLF AMPQQVDSLA LAAAHGVPGR QVACLEDLQE ALAWGLSQQR PVLLRLCSDR GRDAVLRQQL RAAAQNEGTE L
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