Gene Syncc9605_1108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1108 
Symbol 
ID3735488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1042759 
End bp1043757 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content59% 
IMG OID637775699 
Productnitrilase 
Protein accessionYP_381420 
Protein GI78212641 
COG category[R] General function prediction only 
COG ID[COG0388] Predicted amidohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.231003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACAG TCAAAGTTGC TGCCGCGCAA ATCCGTCCCG TCCTGTTCAG CCTGGACGGA 
TCCCTGCAAA AGGTGCTGGA TGCCATGGCC GAAGCCGCGG CTCAAGGGGT GGAACTGATC
GTTTTTCCTG AAACGTTTCT GCCCTATTAC CCCTATTTCT CGTTTGTTGA ACCCCCGGTC
TTAATGGGGA GATCCCATCT GGCTTTATAT GAGCAGGCTG TGGTGGTTCC TGGCCCTGTC
ACCGATGCCG TTGCGGCTGC TGCCAGTCAG TACGGCATGC AGGTTCTGTT GGGCGTCAAC
GAGCGTGATG GTGGAACCCT CTACAACACG CAGTTGTTGT TTAACAGCTG CGGCGAACTG
GTTCTTAAGC GGCGAAAAAT TACGCCGACC TATCACGAGC GGATGGTCTG GGGCCAAGGA
GACGGCTCTG GTCTCAAGGT GGTGCAGACG CCGTTGGCTC GCGTCGGGGC TCTGGCCTGT
TGGGAGCACT ACAACCCCTT GGCTCGCTAC GCCTTAATGG CCCAGGGGGA AGAGATCCAC
TGCGCTCAGT TCCCGGGCTC CTTGGTGGGC CCGATCTTCA CGGAACAGAC CGCCGTCACC
ATGCGCCATC ACGCGCTTGA AGCCGGGTGT TTTGTGATCT GTTCCACCGG TTGGTTGCAC
CCCGACGATT ACGCGTCGAT CACGTCGGAG TCTGGTCTTC ACAAGGCGTT TCAAGGGGGG
TGTCACACCG CTGTGATCAG CCCTGAGGGC CGGTATCTGG CAGGACCCTT GCCAGATGGT
GAGGGTTTGG CGATCGCCGA TCTCGATCTT GCCCTGATCA CCAAGCGCAA ACGGATGATG
GACAGCGTCG GCCATTACAG CCGCCCCGAA CTGTTGTCGT TGCAGATCAA CAGTTCGCCG
GCGGTTCCCG TTCAAAACAT GTCGACTGCA TCGGTTCCAT TGGAGCCGGC CACAGCTACC
GATGCCTTGT CCTCGATGGA GGCGTTGAAC CATGTCTGA
 
Protein sequence
MTTVKVAAAQ IRPVLFSLDG SLQKVLDAMA EAAAQGVELI VFPETFLPYY PYFSFVEPPV 
LMGRSHLALY EQAVVVPGPV TDAVAAAASQ YGMQVLLGVN ERDGGTLYNT QLLFNSCGEL
VLKRRKITPT YHERMVWGQG DGSGLKVVQT PLARVGALAC WEHYNPLARY ALMAQGEEIH
CAQFPGSLVG PIFTEQTAVT MRHHALEAGC FVICSTGWLH PDDYASITSE SGLHKAFQGG
CHTAVISPEG RYLAGPLPDG EGLAIADLDL ALITKRKRMM DSVGHYSRPE LLSLQINSSP
AVPVQNMSTA SVPLEPATAT DALSSMEALN HV