Gene Syncc9605_1081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1081 
Symbol 
ID3737793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1019941 
End bp1020339 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content60% 
IMG OID637775672 
Productputative hydrogenase expression/formation protein HypA2 
Protein accessionYP_381393 
Protein GI78212614 
COG category[R] General function prediction only 
COG ID[COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) 
TIGRFAM ID[TIGR00100] hydrogenase nickel insertion protein HypA 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.143987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAAG TCGACATGAC CAAGTGCCTG CTGATCTCCC TGAATGAATG GCGCGACCGT 
CGCGAAGACA CCTCTGCGAT GGTCGAAACC GTTCATCTCG ATGTGGGGCG ATTCACCTGC
GTTGAACCCG ATCAGTTGGT GACCACTTAC AACGCTGCGG TGCAGGGCAC CTGGCTGGAT
GGATCCCGGC TCACGATCAC GGAAATCCCC TTTCTGGGCC GCTGCTTGAT CTGCAACGGC
ACCTACGACC CCGTGCCCGA AAACGCCTAT CGCTCTCCCT GCTGCGATCA CCCGCTTGAG
GAGATCGTCA GCGGTAGGGA ATTGCGCATC CGCAGCATCG ATTACCGCAG CGATGCCGCC
GCTGCCCTTG AGTCCGCTCC AATCCAGCGT CAGCGCTGA
 
Protein sequence
MHEVDMTKCL LISLNEWRDR REDTSAMVET VHLDVGRFTC VEPDQLVTTY NAAVQGTWLD 
GSRLTITEIP FLGRCLICNG TYDPVPENAY RSPCCDHPLE EIVSGRELRI RSIDYRSDAA
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