Gene Syncc9605_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1071 
Symbol 
ID3737783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1012181 
End bp1013641 
Gene Length1461 bp 
Protein Length486 aa 
Translation table11 
GC content57% 
IMG OID637775662 
Producthypothetical protein 
Protein accessionYP_381383 
Protein GI78212604 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGCT GTCCACCGAT CAGCGGACGA GAAGCGGACG TCGCTGCTGC GATGCAAAAA 
CAACGGCAGG TCTGGTCGAA CAGTGCGATC GATCTTGATC ACCTGCATTC CGGCTTTGCC
TGTGCTCTTC ACATGCACCA ACCAACGGTG CCGGCGGGGG CGAACAAGAG CTTGATCTCT
CATCTTCAAT ACATGCTGGA TCACCCCAAT GAGGGTGATA ACCACAACGC CGAACCATTC
GCCCACTGCT ATCGGCGTCT TGCCGACCTG CTGCCGGAAC TGATCAATGA GGGCTGCAGC
CCAAGAATCA TGCTCGATTA CTCGGGCAAT CTGCTCTGGG GAATCGAGCA GATGGGGCGC
CGCGACATTG GCGATGCACT CAATTACCTC GCCTGTGATC CTTTGATGCA GGGGCATGTG
GAGTGGCTTG GAACCTTTTG GAGCCATGCC GTGGCTCCGT CCACACCCAT CCCAGACCTG
AAACTGCAGA TCAGCGCCTG GCAACAGCAG TTCGAGGCCT GTTTTGGCAG CGCTGCCCTG
GAACGAGTCA AGGGCTTTTC TCCACCGGAG ATGGCGCTAC CCAACCATCC CGACACCCTT
TTCGAATTCA TCAAGGCCCT TAAGGAAGCT GGATATCAGT GGCTCCTAGT GCAAGAGCAC
AGCGTTGAGT GCATGGACGG CAGCCCACTG CAACGCAGCC AATGCTTCGT TCCCAATCAA
CTTCTAGCCA GGAACAGTCG GGGCGAGGAG GTCAGCATCA CGGCACTGAT CAAAACCCAG
GGGTCTGACA CCAAACTTGT GGGGCAGATG CAGCCCTATT ACGAGGCATT GGGTTGCGAA
CGGCAACGTC TTGGTGAAGT CGAGGTGCCA GCACTGGTGA GCCAGATTGC CGATGGAGAA
AACGGTGGGG TGATGATGAA TGAATTTCCA GAGGCTTTCC GGCAGGCCAA TCGCCACATC
CGTGACAACC CCAAAGGCAC CGCGGCAATC AACGGCAGTG AATACCTGGA GACTCTGGAG
CTCAACGGAG TAGATCCTCA CCACTTCCCC GCCATCCAGG CGGTGCAACA ACACCGCCTT
TGGAGTGAAC TTGGCGACAA CACCTCAACC GAAGGGCTGG AGGAGACCAT CAGCAAACTG
ACTGCTGGCG AAACCAGCTT CAGCATGGAG GGTGCGTCCT GGACCAACAA CCTGAGCTGG
GTTGAGGGTT ACGCCAATGT GCTGGCCCCG ATGAATCAAC TCAGCGCTCA GTTTCATGCG
CGGTTCGACC CATCAGTCGC CGCAGACCCC ACCACCACCC GCACCCGGGC TTATCAGGAG
TCATTACTGC ATCTGCTGCT GCTGGAAACC AGTTGTTTTC GGTACTGGGG GCAAGGGGCA
TGGACCGAGT ACGCCAGGGA GATCCATCGA CGTGGAGAGG ATTTGCTGAA CCGGAACACC
GTCACGCCCA ACCAAAACTG A
 
Protein sequence
MTGCPPISGR EADVAAAMQK QRQVWSNSAI DLDHLHSGFA CALHMHQPTV PAGANKSLIS 
HLQYMLDHPN EGDNHNAEPF AHCYRRLADL LPELINEGCS PRIMLDYSGN LLWGIEQMGR
RDIGDALNYL ACDPLMQGHV EWLGTFWSHA VAPSTPIPDL KLQISAWQQQ FEACFGSAAL
ERVKGFSPPE MALPNHPDTL FEFIKALKEA GYQWLLVQEH SVECMDGSPL QRSQCFVPNQ
LLARNSRGEE VSITALIKTQ GSDTKLVGQM QPYYEALGCE RQRLGEVEVP ALVSQIADGE
NGGVMMNEFP EAFRQANRHI RDNPKGTAAI NGSEYLETLE LNGVDPHHFP AIQAVQQHRL
WSELGDNTST EGLEETISKL TAGETSFSME GASWTNNLSW VEGYANVLAP MNQLSAQFHA
RFDPSVAADP TTTRTRAYQE SLLHLLLLET SCFRYWGQGA WTEYAREIHR RGEDLLNRNT
VTPNQN