Gene Syncc9605_1054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1054 
Symbol 
ID3737461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp1002448 
End bp1003197 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content63% 
IMG OID637775645 
Producthypothetical protein 
Protein accessionYP_381366 
Protein GI78212587 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATCG CCCTGCTGGG CATCGCCATA GGCGCCAATG CCCTCTCAGC TTTGGCGGGA 
GGGGGAGCAG GACTGGTGCA ACTGCCCGCC CTCATCCTTC TGGGCCTTCC TTTCTCCATG
GCGCTGGCCA CCCACAAAGT GGCCAGCGTG GCCCTGGGGC TGGGAGCCAC GGGACTTCAT
TGGCGGGCCA GCAGCCTTGA TCTCAAACGC TCCGCGCTGG TGTTGGCCGC CGGTCTCCCA
GGAGTGTTTG TGGGGGCCAG CATGGTTCTT GCGCTGCCGG ATCAAGTGGC CACCACCAGC
CTTGGGCTGC TGACCCTGGG GCTGGGGTTG TACTCGGCCC GGAAACCTGA TCTGGGAACG
ACAGACCAGC CCCGACCCCT GACAGCCCGC ACCGTCGGAC TTGGCAGCTG CGGCCTCTTC
ATCATCGGCA TTCTCAACGG CTCACTAACC TCAGGAACGG GATTATTCGT CACCCTTTGG
ATGGTGCGCT GGTTCGGGCT GAGCTATGCC AGAGCCGTCG CCCACACCCT GGTGCTGGTG
GGTCTGGGGT GGAATGGCAC CGGGGCGCTG GTGCTGGGAT TGAGCGGTGA AATCCGTTGG
GACTGGCTTC CCGCTCTCGT TCTCGGATCG CTGATCGGAG GCTTTCTGGG GGCGCACTAT
TCCCTGGTGA AAGGAAGCCG CCTGGTCAAG CAAGCCTTCG AGATCCTGGC GCTGCTGATG
GGTGGATCAC TCCTGATCCG AAGCCTCTGA
 
Protein sequence
MQIALLGIAI GANALSALAG GGAGLVQLPA LILLGLPFSM ALATHKVASV ALGLGATGLH 
WRASSLDLKR SALVLAAGLP GVFVGASMVL ALPDQVATTS LGLLTLGLGL YSARKPDLGT
TDQPRPLTAR TVGLGSCGLF IIGILNGSLT SGTGLFVTLW MVRWFGLSYA RAVAHTLVLV
GLGWNGTGAL VLGLSGEIRW DWLPALVLGS LIGGFLGAHY SLVKGSRLVK QAFEILALLM
GGSLLIRSL