| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1040 |
|---|
| Symbol | |
|---|
| ID | 3736800 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 990258 |
|---|
| End bp | 991184 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637775632 |
|---|
| Product | cation diffusion facilitator family transporter |
|---|
| Protein accession | YP_381353 |
|---|
| Protein GI | 78212574 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGCACA GTCATCCCAT CGCGATGGTC GACAACCGCC AGGGGGTGCG AAGAGTCCTC
ATGGTGGCCC TGGCCCTGAA CATCAGCATG TCGCTGCTGA AGCTTCTGGT GGGGGCCATG
AGTGGTTCCC TTGCGGTGAT CGCTGATGGC ATGCACAGCG CCACCGACGC GTTGTCCAGC
CTCACGGGAC TGGTCACCAA CAAGCTGTCC GATCCACGTC CCGACAGGGA TCACCCCTAC
GGCCACCGCA AATACGAGGC GGTGGGAGCA CTGGGTATCG CTGGTTTCAT CCTGTTCACA
GCCATCGAGA TCCTGCTTCG TTCAGGGGAG AGGCTCCTGG AGGGCCTGCC TCCCATCCGT
GTGACCAGCC AGGAACTGGT GCTGCTCACG CTGGTGCTGG GATTCAACCT CCTGCTCGCG
GGATATGAGC TGCGGAAAGG TCGGCGACTG AACAGCAACC TGCTCAAGGC AGATGCCCAA
CATGCGGTGA GCGACGTTTG GACCACCGTG TTGGTGCTGG TGGGCATGGC GGGGGCGGTC
TGGTTGCAGG TGAGCTGGCT CGACGTTGCA CTGGCCATCC CCATGGCACT GCTTCTGATT
CGTGTTTGCT GGCAGGTGCT GAGCGGCACC TTGCCCTGGC TGGTGGACCA CATGGCGGTT
GCGCCTGAAG CCATTTATGC CGAAGCCATG GCCACCGCAG GGGTGATGAA CTGCCACGAC
ATCGCCAGCC GGGGCGTTCT TGGCCAGCAG GTGTTCATCG AAATGCATAT GGTTGTCGAC
GCTGACGACC TCACCAAGGC GCACCGGATC ACCGAACAGG TGGAAGAGCG CTTGGACGAA
AGCTTCGGGC CGGTGCGGTG CACCATTCAT CTGGAACCCA AGGACTACGT GGAGGACGGG
ATCACATATA CCGGCGCCCA TGGCTGA
|
|---|
| Protein sequence | MTHSHPIAMV DNRQGVRRVL MVALALNISM SLLKLLVGAM SGSLAVIADG MHSATDALSS
LTGLVTNKLS DPRPDRDHPY GHRKYEAVGA LGIAGFILFT AIEILLRSGE RLLEGLPPIR
VTSQELVLLT LVLGFNLLLA GYELRKGRRL NSNLLKADAQ HAVSDVWTTV LVLVGMAGAV
WLQVSWLDVA LAIPMALLLI RVCWQVLSGT LPWLVDHMAV APEAIYAEAM ATAGVMNCHD
IASRGVLGQQ VFIEMHMVVD ADDLTKAHRI TEQVEERLDE SFGPVRCTIH LEPKDYVEDG
ITYTGAHG
|
|---|
| |