| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1029 |
|---|
| Symbol | |
|---|
| ID | 3735276 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 978979 |
|---|
| End bp | 981081 |
|---|
| Gene Length | 2103 bp |
|---|
| Protein Length | 700 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637775621 |
|---|
| Product | oligopeptidase A |
|---|
| Protein accession | YP_381342 |
|---|
| Protein GI | 78212563 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0339] Zn-dependent oligopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.434971 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGACTG TTTCCCCCCT CCTGCGCGGC CAAGGGCTTC CCGAGTTCCG AGCCATTTCC
CCTGAGCTCG TCAGCACAGA CATCCCGGTT CTGCTCGCAC AGCTGGATCA GGACTTCACT
GCCCTAGAGC AGGCTCTTGA TTCAGCCCTA GCCGGTCCCT CGAAGCTGTC CTGGAATCGG
GTGATGCAAC CGCTGCAGGC CATCGGCGAA CGGCTGCGTT GGAGCTGGGG TGTGGTGTCG
CACCTCAATG GCGTCTGCAA TTCCGCTGAG CTGCGCGATG CCCACGCCGC CCAGCAGCCC
GATGTTGTGC GCCTCAGCAA CCGGCTTGGC CAAAGCCAGA TTCTTCATCG GGCCCTGATG
GCCCTTCAAA GCGATCCAGC CGAACCGCTC AACTTTACCC AGAAGCGGAT CCTGAAATCA
GAACTGCTCT CGATGCAGCA ACGCGGTGTT GGCCTCAGTG GCGATGAGAA GGCAGCCTTC
AACAGCACCA GTGAACGCCT TGCCGCCCTC TCCACCCAGT TCGGCAACCA CGTGCTCGAT
GCCACGCAGC AGTGGACTTT GAAGCTCAGC CAGCCCCACG AGGTGGAAGG CCTGCCGCAA
CGGGCCTTGG AGGCGCTGGC CGCAGCAGCG CGCGCAGCGG GGGATGCTGA AGCGTCTGCG
GAGTCCGGCC CGTGGCTGCT GGGACTGGAC ATGCCCCGCT ATCTGCCCTT CCTCACCCAC
GCCAACAACC GATCCCTGCG GGAAAAGGCC TATCGCGCCC ATGTGGGGCG GGCCAGTGAA
GGCGAACACG ACAACCGAGC ACTGATCGAG GAGATCCTGA CCCTGAGGCG CGAACAATCG
TCCCGTCTGG GCTACGCCCA CTGGGCTGAT CTGAGCCTCA GCGCCAAGAT GGCCGACGAT
GTTCCGGCGG TTGAAGCACT GCTGGAAGAA CTTCGCGCTG CGGCCTATCC CGCAGCTGAG
CAAGAGCTGC GGGATCTCCA AGCCATCGCC AGAGAGCACA AGGCCCCCGA AGCCGACGAG
CTGGCTCCCT GGGACATCGC CTACTGGTCG GAGAAGTTGC GCCAATCACG GTTCGATCTG
GACCAGGAAG CGCTGCGTCC CTGGTTCCCG CTGCCGCAGG TGCTCGAAGG CCTGTTCAGC
CTTTGTACTC GTCTATTCGA CGTCGAGATC GTTGCCGCCG ACGGCGAAGC ACCGACCTGG
AACGATGACG TGCGCTTCTT CCGTGTGAAG CGCACGGATG GCACACCGAT CGCAGGCTTC
TACCTCGACC CCTACAGCCG GCCTGCCAGC AAACGCGGTG GAGCCTGGAT GGATGAATGC
CTGGGCCTCA GCAAGAAACC CGATGGATCG GTGGTGCTGC CTGTGGCCTA TCTGGTCTGC
AACCAGACCC CACCTGTGGG CGACACGCCA AGCCTGATGA GCTTCGAGGA GGTGGAGACC
CTCTTCCATG AATTCGGCCA TGGTCTCCAG CACATGCTCA CCACCGTTGA GGAACCGGAA
GCAGCCGGCA TCAGCAACGT GGAATGGGAT GCCGTGGAAC TCCCCAGCCA GTTCATGGAG
AACTGGTGCC TTGATCACGC CACGTTGATG GGAATGGCGT GCCACTGGCA GACCGGTGAA
CCCCTGCCCG AGACGGAATT CAACAAGCTG CGCAGCAGCC GCACCTTCAA TGCAGGTCTT
GCCACCCTGC GGCAGGTTCA CTTCGCCCTG AGTGACCTCC GCCTCCACAG CCGGTGGACC
CCCGAACTTG GCATCACCCC AGACGAACTG CGCCGTGAGA TTGCCGCCAC CACCACGGTG
ATGGCTCCCA TCCCGGAGGA TCAGTTCCTC TGCGCCTTCG GCCACATCTT CGCGGGGGGC
TACTCCGCTG GGTACTACTC CTACAAATGG GCTGAAGTTC TCAGTGCCGA TGCCTTCTCC
GCTTTTGAGG AGATTGGTCT GGATCAAGAG GAGCAGATTC GCGAAACGGG AGCCCGCTTC
CGCGACACCG TGCTCAGCCT CGGGGGCAGC CGCTCCCCAG CAGAAGTGTT TGAAGCCTTC
CGAGGGCGCC CAGCCAGCAC CGAAGCATTG ATTCGCCATT CCGGCCTGGT GGCCGCGGCC
TGA
|
|---|
| Protein sequence | MSTVSPLLRG QGLPEFRAIS PELVSTDIPV LLAQLDQDFT ALEQALDSAL AGPSKLSWNR
VMQPLQAIGE RLRWSWGVVS HLNGVCNSAE LRDAHAAQQP DVVRLSNRLG QSQILHRALM
ALQSDPAEPL NFTQKRILKS ELLSMQQRGV GLSGDEKAAF NSTSERLAAL STQFGNHVLD
ATQQWTLKLS QPHEVEGLPQ RALEALAAAA RAAGDAEASA ESGPWLLGLD MPRYLPFLTH
ANNRSLREKA YRAHVGRASE GEHDNRALIE EILTLRREQS SRLGYAHWAD LSLSAKMADD
VPAVEALLEE LRAAAYPAAE QELRDLQAIA REHKAPEADE LAPWDIAYWS EKLRQSRFDL
DQEALRPWFP LPQVLEGLFS LCTRLFDVEI VAADGEAPTW NDDVRFFRVK RTDGTPIAGF
YLDPYSRPAS KRGGAWMDEC LGLSKKPDGS VVLPVAYLVC NQTPPVGDTP SLMSFEEVET
LFHEFGHGLQ HMLTTVEEPE AAGISNVEWD AVELPSQFME NWCLDHATLM GMACHWQTGE
PLPETEFNKL RSSRTFNAGL ATLRQVHFAL SDLRLHSRWT PELGITPDEL RREIAATTTV
MAPIPEDQFL CAFGHIFAGG YSAGYYSYKW AEVLSADAFS AFEEIGLDQE EQIRETGARF
RDTVLSLGGS RSPAEVFEAF RGRPASTEAL IRHSGLVAAA
|
|---|
| |