| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_1007 |
|---|
| Symbol | |
|---|
| ID | 3735758 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 953976 |
|---|
| End bp | 956564 |
|---|
| Gene Length | 2589 bp |
|---|
| Protein Length | 862 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637775599 |
|---|
| Product | ATPase |
|---|
| Protein accession | YP_381320 |
|---|
| Protein GI | 78212541 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
|---|
| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.783787 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACCCA CGGCGGAACA GTTCACAGAA CAAGCCTGGG CCGCCATCAT CGCCGCCCAG
CAACTGGCGC AGAGCGCCAA GCATCAGCAA CTGGAAACGG AGCATCTGCT GCTTGCGCTG
TTGCAGCAGA ACGGGCTGGC TGGACGCATT CTCAGCAAAG CAGGGGTCGA TGTTGGCAAT
TTCCAGGCGG CCATCGACAG CCATCTCAGG CAGCAGCCCA GTCTTGGCTC TCCACCGGAA
TCGGTGTTTC TGGGACGCTC CCTGAACAGC TGCCTGGATC GCGCCGAAAC AGCCCGCGAT
GGATTCAGTG ACAGCTACAT CGCCATCGAA CATCTGTTGC TGGCCCTGGC CGACGATCAA
CGCTGCGGCA GGCAACTGCT CAGCCAAGCG GGCGTTGACA CCAGCAAACT CAACGAAGCC
ATTACAGCCG TGCGAGGCAA CCAGACGGTG ACCGATCAAA ACCCGGAAGG GACCTATGAA
TCGCTTGAGA AGTACGGACG GGACCTGACG GCCGCCGCCC GTGACGGAAA GCTGGACCCA
GTGATCGGTC GCGACGAGGA GATCCGTCGC ACCATCCAGA TCCTCAGCCG GCGCACCAAA
AACAACCCCG TGCTGATCGG CGAACCAGGG GTGGGAAAGA CCGCCATTGT TGAGGGACTG
GCGCAGCGCA TCGTCAACGG TGATGTGCCC CAGGCCTTGC AGAACCGTCA GCTCATCGCC
CTCGACATGG GAGCCCTGAT CGCCGGTGCG AAATATCGCG GTGAGTTCGA GGAACGGCTC
AAAGCTGTAC TCAAGGAGGT CACTGCCTCG GAAGGCCAGA TCGTGCTGTT CATCGATGAA
ATCCACACGG TGGTGGGCGC TGGAGCCACC GGTGGAGCCA TGGATGCCAG CAATCTGCTC
AAGCCGATGC TGGCCCGGGG GGAACTGCGC TGCATTGGCG CCACCACCCT CGACGAGCAC
CGCCAGCACA TCGAAAAAGA TCCTGCCCTG GAGCGACGCT TCCAGCAGGT GCTGGTGGAT
CAACCCACGG TGGAAGACAC GATTTCGATC CTGCGGGGTC TGAAAGAGCG TTATGAGGTG
CATCACGGTG TGCGCATTGC CGACAGTGCC TTGGTGGCAG CGGCTGTGTT GAGCAGCCGC
TACATCGCCG ACCGCTTTCT GCCGGACAAA GCGATCGATC TGGTGGATGA ATCAGCTGCT
CGCCTGAAAA TGGAGATCAC CTCCAAACCG GAGGAGATCG ATGAAATCGA TCGCAAGATC
CTGCAGCTGG AGATGGAGAA GCTCTCCCTG GGCCGTGAAT CCGACAGTGC CAGCCAGGAG
CGGCTGCAAC GGATCGAGCG GGAACTGGCA GACCTGGGCG AACAGCAAAG TTCCCTTAAT
GCCCAGTGGC AGCAGGAGAA AGGCGCGATC GATGAGCTGT CGTCGCTCAA GGAAGAGATC
GAACGGGTGC AGCTGCAGGT GGAACAGGCC AAACGCAGCT ACGACCTCAA CAAAGCGGCG
GAACTGGAAT ACGGCACCCT GGCCTCGCTG CAGAAGCAGT TGCTCGAACA GGAAACCCAG
ATTGCCTCAG AGGAGCCTGG CGAGAAAGGC TTGCTGCGGG AAGAGGTGAG TGAAGACGAC
ATCGCCGAGG TGATCGCCAA GTGGACCGGA ATCCCAGTGG CGCGGCTGGT GCAGAGCGAA
ATGGAGAAGC TGCTGCAGCT GGAGGATGAC CTGCATCAGC GGGTGATCGG CCAGCACAAG
GCCGTCACCG CCGTCGCGGA TGCAATTCAA CGCTCCAGGG CTGGCCTGAG CGACCCGAAT
CGTCCGATCG CCAGCTTCCT GTTCCTCGGC CCCACCGGTG TGGGCAAGAC GGAACTCTCC
AAGGCGCTCG CCAACCGGCT GTTCGACAGC GACGACGCCA TGGTGCGCAT CGACATGTCG
GAGTACATGG AGAAGCACAC CGTGAGCCGT TTGATCGGGG CACCTCCCGG CTACGTGGGG
TATGAGGCCG GTGGCCAGCT CACCGAAGCG GTGCGTCGTC GGCCTTATGC CGTGATCCTG
TTCGACGAGG TGGAGAAAGC CCACCCGGAT GTCTTCAACG TAATGCTGCA GATCCTCGAT
GACGGCCGTG TCACCGATGG GCAGGGCCGC ACCGTGGACT TCACCAACAC CGTGCTGATT
CTCACCAGCA ACATCGGCAG CCAGTCGATC CTGGAGCTGG CCGGCGATCC CGAGCAGCAT
CGAGCAACAG AAAGCCGGGT GAATGAGGCT CTCAGGGCCC ATTTCCGGCC GGAATTCCTC
AATCGCCTCG ACGATCAGAT CATCTTCCAC AGCCTCAGGC GGGCGGAACT GCGCCAGATC
GTCACCCTCC AGGTGGAACG TCTGCGCCAG CGGCTGGCTG AGCGCAAGCT GGAGCTCAGC
CTGAGCGATG GGGCTGCCGA CTGGCTTGCC AGTGCCGGAT ATGACCCCGT CTACGGGGCC
CGACCACTGA AGCGGGCTGT GCAACGGGAA CTGGAGACTC CCATTGCCAA GCTGATCCTT
TCCGGGCGAC TGGGCGAGAA CAGTGCCATC GCAGTTGACG TCGATGGAGA GCAGCTCTCA
ATCGGATGA
|
|---|
| Protein sequence | MQPTAEQFTE QAWAAIIAAQ QLAQSAKHQQ LETEHLLLAL LQQNGLAGRI LSKAGVDVGN
FQAAIDSHLR QQPSLGSPPE SVFLGRSLNS CLDRAETARD GFSDSYIAIE HLLLALADDQ
RCGRQLLSQA GVDTSKLNEA ITAVRGNQTV TDQNPEGTYE SLEKYGRDLT AAARDGKLDP
VIGRDEEIRR TIQILSRRTK NNPVLIGEPG VGKTAIVEGL AQRIVNGDVP QALQNRQLIA
LDMGALIAGA KYRGEFEERL KAVLKEVTAS EGQIVLFIDE IHTVVGAGAT GGAMDASNLL
KPMLARGELR CIGATTLDEH RQHIEKDPAL ERRFQQVLVD QPTVEDTISI LRGLKERYEV
HHGVRIADSA LVAAAVLSSR YIADRFLPDK AIDLVDESAA RLKMEITSKP EEIDEIDRKI
LQLEMEKLSL GRESDSASQE RLQRIERELA DLGEQQSSLN AQWQQEKGAI DELSSLKEEI
ERVQLQVEQA KRSYDLNKAA ELEYGTLASL QKQLLEQETQ IASEEPGEKG LLREEVSEDD
IAEVIAKWTG IPVARLVQSE MEKLLQLEDD LHQRVIGQHK AVTAVADAIQ RSRAGLSDPN
RPIASFLFLG PTGVGKTELS KALANRLFDS DDAMVRIDMS EYMEKHTVSR LIGAPPGYVG
YEAGGQLTEA VRRRPYAVIL FDEVEKAHPD VFNVMLQILD DGRVTDGQGR TVDFTNTVLI
LTSNIGSQSI LELAGDPEQH RATESRVNEA LRAHFRPEFL NRLDDQIIFH SLRRAELRQI
VTLQVERLRQ RLAERKLELS LSDGAADWLA SAGYDPVYGA RPLKRAVQRE LETPIAKLIL
SGRLGENSAI AVDVDGEQLS IG
|
|---|
| |