Gene Syncc9605_1001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_1001 
Symbol 
ID3735752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp950059 
End bp950550 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content59% 
IMG OID637775593 
Producthypothetical protein 
Protein accessionYP_381314 
Protein GI78212535 
COG category[S] Function unknown 
COG ID[COG3556] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.379029 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTGG CCGTCGCTCT CACGTCCGAC ATCGCCAAAA ACGCAGGCGT TGCCTACGTT 
CACTACCTCA GTTTCATGCT CTGCTTCGGC GCTCTGGTGC TGGAGCGGAA GCTGATCAAA
GCTGATCCGA ATCGCCAGGA AGCCACGGCG ATGGTGATCA CCGACATTGT TTATGGCATT
GCCGCCCTTG CTCTTCTCGT CAGTGGAATC CTGCGGGTCA TCCACTTCGG CCAAGGGGCT
GAGTTCTACA CCCAGAATCC GCTGTTCTGG TGGAAGGTTG GTTTGTACCT CTCCGTGGGG
GGGCTGTCGC TCTATCCCAC GATCACCTAC ATCCTCTGGG CGATTCCGCT GCGCAAGGGT
GAGCTGCCGA AGGTGAGCGA AGCCCTCGCC AAGCGTCTGG CCTGGATCAT CAATATTGAA
TTGGTGGGCT TCGCCAGCAT TCCGTTGATG GCGACCCTGA TGGCCCGCGG TGTTGGTCTC
CCAGCCGCCT GA
 
Protein sequence
MPLAVALTSD IAKNAGVAYV HYLSFMLCFG ALVLERKLIK ADPNRQEATA MVITDIVYGI 
AALALLVSGI LRVIHFGQGA EFYTQNPLFW WKVGLYLSVG GLSLYPTITY ILWAIPLRKG
ELPKVSEALA KRLAWIINIE LVGFASIPLM ATLMARGVGL PAA