| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0990 |
|---|
| Symbol | trpA |
|---|
| ID | 3737628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 944001 |
|---|
| End bp | 944873 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637775582 |
|---|
| Product | tryptophan synthase subunit alpha |
|---|
| Protein accession | YP_381303 |
|---|
| Protein GI | 78212524 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0159] Tryptophan synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGCCCC CGTCGACTCA TAGGCTTTCG AAGTTTGTTC CTGGTCGGTT GACCGAGATG
CCCAATCAGC AGTCCTCTTC CATCGCCCAG CGCTTTGAGC AGCTGAAGCA GGACGGTCGC
CTTGCCTTGA TGCCATTCCT GATGGCTGGC GATCCTGATC TCGCGGTCAC CGCTGATGTG
CTTCTCAGTC TGCAAATGGC AGGGGCCGAC ATGGTGGAAC TGGGGATGCC GTACAGCGAC
CCGCTCGCGG ATGGGCCGGT CATTCAGGCC GCTGCGTCCC GTGCCCTTGC TGCCGGAACC
ACGCCAACGG GCGTGCTGGA CATGCTGCAG TCGTTGAAGG GTCAGCTGCA GATCCCGGTG
ATCCTGTTCA CGTATTCCAA TCCACTGCTC AATGTGGGGA TGGAGGCGTT CTGCCAGTCT
GCAGCGGAGG CTGGTGCGGC GGGTTTGGTG GTGCCTGATC TCCCCCTCGA GGAGGCCGAG
CGGTTGTCAA CCATCGCCGA GCGTCATGGC TTGGATTTGG TGCTCTTGGT TGCACCCACC
ACTCCTCAAG ATCGGATGGG TCGGATTGCC AAATGCAGCC GTGGTTTCAC CTATCTGGTG
AGTGTCACTG GCGTCACCGG TGAGCGAGCT CAGATGGAAA GCAGGGTTGA AGGTTTGGTG
CAGCAACTCA AACAAACCTC TCCGGTTCCT GTTGCGGTTG GTTTCGGTAT CTCTGGGGCG
GAGCAGGTGC GACAGGTTCG GGGCTGGGGT TCCGATGGAG CGATTGTGGG CAGCGCGCTC
GTGAAGCGGA TGGCTGCAGC ATCGCCAGGA GAAATTGCAC AGGAAGCTGG TCGTTTTTGC
GCTGAGCTGC GTGCCGCGGC GGATCAGCCT TAA
|
|---|
| Protein sequence | MRPPSTHRLS KFVPGRLTEM PNQQSSSIAQ RFEQLKQDGR LALMPFLMAG DPDLAVTADV
LLSLQMAGAD MVELGMPYSD PLADGPVIQA AASRALAAGT TPTGVLDMLQ SLKGQLQIPV
ILFTYSNPLL NVGMEAFCQS AAEAGAAGLV VPDLPLEEAE RLSTIAERHG LDLVLLVAPT
TPQDRMGRIA KCSRGFTYLV SVTGVTGERA QMESRVEGLV QQLKQTSPVP VAVGFGISGA
EQVRQVRGWG SDGAIVGSAL VKRMAAASPG EIAQEAGRFC AELRAAADQP
|
|---|
| |