| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0984 |
|---|
| Symbol | |
|---|
| ID | 3737621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | - |
|---|
| Start bp | 939145 |
|---|
| End bp | 940230 |
|---|
| Gene Length | 1086 bp |
|---|
| Protein Length | 361 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637775575 |
|---|
| Product | K+-dependent Na+/Ca+ exchanger related-protein |
|---|
| Protein accession | YP_381297 |
|---|
| Protein GI | 78212518 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0530] Ca2+/Na+ antiporter |
|---|
| TIGRFAM ID | [TIGR00367] K+-dependent Na+/Ca+ exchanger related-protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.233061 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAT TCCTCCAGGC CTCGATCCAA GTGCTGCTGG GCATCGGGCT GCTGTTCGGT
GGCGGAGAAT TGTTTGTTCA GGGGTCCGTC GCCATGGCGG TGATCTTTGG CATCCCCCAG
CTCGTGATCG GCCTCACGGT GGTTTCCCTG GGCACCAGCG CCCCGGAACT GTTCGTGAGT
CTGAACTCAG TGCTGCAGGG GGCTGACACC CTCGCCGTGA GCAATGTGGT GGGCAGCAAC
ATCTTCAACG TGATGGTGGT GCTGGGCAGC AGCGCCCTTG TGCTGCCGTT GCGCGTCGAA
AGCCGTCTGG TGCGGCGCGA TGTTCCTCTG ATGATTGCCA TCTCGGCGGC GGTCTGGGGC
ATGGCCTCCG CAGGACGGGT CACCTGGCAG GCGGGCCTGG CCTTGCTGTT GGGGCTTGTG
ATCAACACCA TCTGGGAGAT CCGCACCGCC CGCGAACAAC CAGACGACAG CGGCAGCGCT
GAACCCGAGA TCGAAGAGGA CGCGGCGAGC GGCGGCTGGA CCCTTGCCAT CCTGCGGCTG
ATCGGAGGGA TTGGAATCCT CACCATCGGA TCCCGGGTGC TGGTGAGCGG CGCCACAGCA
GCAGCCACCT ACCTCGGGGT GAGTGAGGCG GTGATCGGTC TGACGATCGT TTCCGCCGGA
ACCTCAATGC CGGAATTGAT CACCTCCCTG GTGGCAGCCC TGCGCGGGCG CACCGATCTG
GCCATTGGCA ACGTGGTGGG CAGCTGCCTG TTGAACCTGC TGCTGGTGCT GGGTGGTGGA
GCCTTGGCTG CCGCTGGTCG TGGCCTGGAG GTCAGCCCCG AATTGATTCA GGACGACCTA
CCTGTGATGT TGCTCACCAG CCTGGCCTGC ATGCCGATCT TCTGGACGCG CGGACGGATC
AGCCGACTCG AAGGTGGACT GTTGCTGGGC TTGTACATCC TCTACATCGT TGACAACGTC
CTTCCCCGAA CAACCCTCGC CAGTTGGTCG GACGAGTTCA GGCTTTTGAT GCTCTGTTTT
GTACTGCCGG TGGTGTTGAT CGTGATCATG ACCCAGGCGT TGGTGTTCTG GCGCACCAAG
ACCTAG
|
|---|
| Protein sequence | MPEFLQASIQ VLLGIGLLFG GGELFVQGSV AMAVIFGIPQ LVIGLTVVSL GTSAPELFVS
LNSVLQGADT LAVSNVVGSN IFNVMVVLGS SALVLPLRVE SRLVRRDVPL MIAISAAVWG
MASAGRVTWQ AGLALLLGLV INTIWEIRTA REQPDDSGSA EPEIEEDAAS GGWTLAILRL
IGGIGILTIG SRVLVSGATA AATYLGVSEA VIGLTIVSAG TSMPELITSL VAALRGRTDL
AIGNVVGSCL LNLLLVLGGG ALAAAGRGLE VSPELIQDDL PVMLLTSLAC MPIFWTRGRI
SRLEGGLLLG LYILYIVDNV LPRTTLASWS DEFRLLMLCF VLPVVLIVIM TQALVFWRTK
T
|
|---|
| |