Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0972 |
Symbol | |
ID | 3736902 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 926507 |
End bp | 927685 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637775563 |
Product | PDZ/DHR/GLGF |
Protein accession | YP_381285 |
Protein GI | 78212506 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.160353 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGATCC GCTCAGGCCG TCTTAAATGC ATCAGCACAC ATCTCGTCGT GATGCCCAAC GCCCAGCATT GGCTTGCCAT CGCCCTGGCC GGAAGCGCAC TCTCCGGTTG CAGCCTGGTG AGAGACCAGC TGGGCCTGAC GCCCAAGCCA CCGATGACAG CGCCGCCGGT AGTGCACGAT CAGCCCCGAA GTGCTCCGCT GCAGCCGGGG GACAACGTGA TCGTGAAGGC GGTGGATCGC GTCGGCCCTG CCGTGGTGCG CATCGATGTG GTGAAGGAGA TCTCAAACCC CTTCGGAGAG ATTTCCGGCA TGGGTCCCTC CAGCCAGCGG CAGCAGGGCC AGGGCTCCGG TTTCATCACC CGGACCAGCG GCCTGATCTT CACCAATGAG CACGTGGTGC GTGGTGCTGA TCAGGTGGCC GTGACCCTTC CGGACGGTCG CAACTTCAAA GGCAAGGTGC TCGGCACCGA CCCCCTCACC GACGTCGCGG TGGTGAAAGT GGTGGCTGAC AAGCTGCCGG TGGCGGCCTT GGGCAACTCC GACCAGCTCA AGCCAGGCGA ATGGGCCATT GCCATCGGAA ATCCGTTTGG GCTCAACAAC ACCGTGACCG CCGGCATCAT CAGCGCCGTC GATCGCACCG ATGCCCTCGG CTCCGGACGA CGGGTGCCCT ACATCCAGAC CGATGCAGCG GTGAACCCCG GCAACAGCGG CGGCCCCCTG ATCAATGCCA GCGGTCAGGT AATCGGCATC AACACCGCGA TCCGTACTGC CCCCGGCGGC GGCTTGAGTT TTGCGGTTCC GATCAACCTG GCCAAGCGGA TCGCGCAACA GATCGTTAGC ACCGGTCAAG CTTCCCATCC CTTCATCGGC GTGCAGCTGA TGCCCCTCAC CCCGCAGCTA GCCCGGGAGA TCAATGCCAC CAACAGTGCC TGCAGCGTTC CCGAGGTGAA TGGTGTTCTG GTCAAGGAGG TGGTGAAAGG CACACCGGCC GCCGCAGCTG GCATCCGCCA GTGCGATCTC ATTCTCAAGG TGGAGAACAA CCCCGTTCAA ACGCCCACCG ACGTTCAACT CGCCGTTGAC CGCGGCCAGG TAGGAGAACC GATGCAGCTC ACCCTCCAAC GCAACGGAGA GGACCTGACC GTGGAGGTGC GCCCGCGAGA ACTGCCGCGC AACAACTGA
|
Protein sequence | MPIRSGRLKC ISTHLVVMPN AQHWLAIALA GSALSGCSLV RDQLGLTPKP PMTAPPVVHD QPRSAPLQPG DNVIVKAVDR VGPAVVRIDV VKEISNPFGE ISGMGPSSQR QQGQGSGFIT RTSGLIFTNE HVVRGADQVA VTLPDGRNFK GKVLGTDPLT DVAVVKVVAD KLPVAALGNS DQLKPGEWAI AIGNPFGLNN TVTAGIISAV DRTDALGSGR RVPYIQTDAA VNPGNSGGPL INASGQVIGI NTAIRTAPGG GLSFAVPINL AKRIAQQIVS TGQASHPFIG VQLMPLTPQL AREINATNSA CSVPEVNGVL VKEVVKGTPA AAAGIRQCDL ILKVENNPVQ TPTDVQLAVD RGQVGEPMQL TLQRNGEDLT VEVRPRELPR NN
|
| |