Gene Syncc9605_0970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0970 
Symbol 
ID3736900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp925187 
End bp925876 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content66% 
IMG OID637775561 
Producthypothetical protein 
Protein accessionYP_381283 
Protein GI78212504 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.801732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGGC TAAGCGTTGT GATTCCAACC CTGGAGGAAG CCAGCAGGCT GCCACTGCTG 
CTGGCGGATC TGCAGCGATG GCCAGGAGAC TTGGAGGTGA TCGTCTCCGA CGCAGGCAGC
CGGGATCAGA CCCGAGTGGT GGCGCAGCTG GCCGGTGCCA GCGTGCTCGA CAACCCGCAA
TCCGGACGGG GGCCACAGCT GCGCTGGGGC GTCGACCACA GCTCCCATGC CTGGGTGCTG
GTGCTGCACG CCGACAGCCG CCTCCCGGGC AGCTGGCATC AAAAGGTGGC GAGGGTTCTC
GACAGGCCGG AGTCTCACCT GAGCGCCTGG TTCTTCAACT TCAACGTGGA TGCAGACGGG
CGGCCGATGC TGTGGCTGCT GAAGCGGATG GTGAACCTGC GCAGCCATTG GCTGCAACGG
CCTTACGGCG ATCAGGGCCT GTTGATTCAG CGCCAGCTGT ATGAGCGGGT GGGCGGCTAC
CGGCCCCTGG CGCTGATGGA AGACCTGGAC CTGGTGGAAC GCCTGAGCAA GGTCGCTCCC
CTCCGTTCAT TGAACTGCTC CCTGCTCACC AGCGGGGAGC GCTGGCAGTC GCGGAGAGTG
CTGATGCAGG CCTGGCGCAA TGCCCGGCTG CGCTGGCTCT GGCGGCAGGG CCGATCAACG
GAGCAGCTGT TGCGGATCTA TCGGCGTTGA
 
Protein sequence
MAGLSVVIPT LEEASRLPLL LADLQRWPGD LEVIVSDAGS RDQTRVVAQL AGASVLDNPQ 
SGRGPQLRWG VDHSSHAWVL VLHADSRLPG SWHQKVARVL DRPESHLSAW FFNFNVDADG
RPMLWLLKRM VNLRSHWLQR PYGDQGLLIQ RQLYERVGGY RPLALMEDLD LVERLSKVAP
LRSLNCSLLT SGERWQSRRV LMQAWRNARL RWLWRQGRST EQLLRIYRR