Gene Syncc9605_0965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0965 
Symbol 
ID3736895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp921002 
End bp921427 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content62% 
IMG OID637775556 
Productendoribonuclease L-PSP 
Protein accessionYP_381278 
Protein GI78212499 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0251] Putative translation initiation inhibitor, yjgF family 
TIGRFAM ID[TIGR00004] endoribonuclease L-PSP, putative 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGG TGACTGCTGT TCAGAACCAC CCCATGAGCG CCAAGGCCAT CACCACACAA 
GACGCCCCTG CACCGGTTGG GCCCTACAAC CAGGCGGTGC TTGCCGGCGA ATGGCTCTAC
TGCTCCGGAC AGATTCCACT GGATCCAGCA ACCGGCGAGA TGGTGGGAAA CGGTGATGTG
GCGGCGGAAA CGCATCAGGT GCTGAAAAAC CTCTGTGCTG TGTTGAAAGA AGCCGGCGCC
ACGCCTGCTC AGGTGGTGCG CACCACGGTG TTCCTGGCGG ACCTGGGCGA TTTCCAAACC
GTGAATGGCA TCTATGCCGA GGTGTTTGGT GAGGGGGTCA GTCCAGCTCG CGCCTGCGTT
CAGGTGGCAG CTCTCCCCAA GGGAGCACGG GTGGAAATCG ACTGCGTCGC CTGGCTCGGC
AGCTGA
 
Protein sequence
MIEVTAVQNH PMSAKAITTQ DAPAPVGPYN QAVLAGEWLY CSGQIPLDPA TGEMVGNGDV 
AAETHQVLKN LCAVLKEAGA TPAQVVRTTV FLADLGDFQT VNGIYAEVFG EGVSPARACV
QVAALPKGAR VEIDCVAWLG S