Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0965 |
Symbol | |
ID | 3736895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 921002 |
End bp | 921427 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637775556 |
Product | endoribonuclease L-PSP |
Protein accession | YP_381278 |
Protein GI | 78212499 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGAGG TGACTGCTGT TCAGAACCAC CCCATGAGCG CCAAGGCCAT CACCACACAA GACGCCCCTG CACCGGTTGG GCCCTACAAC CAGGCGGTGC TTGCCGGCGA ATGGCTCTAC TGCTCCGGAC AGATTCCACT GGATCCAGCA ACCGGCGAGA TGGTGGGAAA CGGTGATGTG GCGGCGGAAA CGCATCAGGT GCTGAAAAAC CTCTGTGCTG TGTTGAAAGA AGCCGGCGCC ACGCCTGCTC AGGTGGTGCG CACCACGGTG TTCCTGGCGG ACCTGGGCGA TTTCCAAACC GTGAATGGCA TCTATGCCGA GGTGTTTGGT GAGGGGGTCA GTCCAGCTCG CGCCTGCGTT CAGGTGGCAG CTCTCCCCAA GGGAGCACGG GTGGAAATCG ACTGCGTCGC CTGGCTCGGC AGCTGA
|
Protein sequence | MIEVTAVQNH PMSAKAITTQ DAPAPVGPYN QAVLAGEWLY CSGQIPLDPA TGEMVGNGDV AAETHQVLKN LCAVLKEAGA TPAQVVRTTV FLADLGDFQT VNGIYAEVFG EGVSPARACV QVAALPKGAR VEIDCVAWLG S
|
| |