Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0920 |
Symbol | |
ID | 3737556 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 885709 |
End bp | 888207 |
Gene Length | 2499 bp |
Protein Length | 832 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637775514 |
Product | hypothetical protein |
Protein accession | YP_381237 |
Protein GI | 78212458 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4354] Predicted bile acid beta-glucosidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.694299 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTTCGT TCGGTTGGTA CGCTCTGAAC TCCCTGCTGG GTCGCGGCAA GCAAGCCAAG CGCTGGCAGC CACCGGAGGC CTCCTGGAGC CGACCCTTCG GCCTGGGCTG GGACAAGCCC TACACGGTTC GCTATGCCAG CAACCTCGAC GACGGCCCCA ACCACGGCAT GCCGCTGGGG GGCTTCGGCG CTGGCTGCTT CGGGCGGGCG CCCGACGGCA ACATCAACCT CTGGCACCTC GATGGCGGTG AGCACTGGTT TGGAGTGCTG CCTGATTGCC AGTTCGCCCT GTTTGAAGGG AATGGTCGCG GCAAGCGCGC CCACGCCCTG GCGGTTCAGC CGGAGCAGGA TGCTTCGCGG CCGGAGGCTG GCCAGCCGCT GAAGGTCTGG GAGTGGTACC CGGCCAGCAC GCCGGATCGC AGCACCGGCA CCTACGCCGC CCGTTACCCC CTCAGCTGGA CCAGCTATGA GGGTGTGTAC GACGCAGAGG TGCGTTGTGA GGCCTTCAGC CCGATCCTGC CGGGTGATTA CCAGCGCACC AGCTACCCTG TGGTGGTGTT CGTCTGGACG CTGCGCAATC CCACCGACCA ACCTCTGGAT TTGTCGTTGC TGCTGAGTTG GCGCAACACC ACTGGTTGGT TCACCAACAC CGATGCCTCG GCGGAGGTTC ACTTCCGCGA TGACGGCAGC CCGGAGCACA ACTACGCCCC GGCCATCGGC AGCACCGCCG GCCAGCGCAA CTGTTGTATT GACGATGGCT CCCTCAAGGG AGTGTTGCTC GAAGGCAACG TCTCCGATCC CGTTGCCGAG GGCGAGGGCC AGTGGTGCAT TGCCACAGCC GAGCAGCCCG GTGTGACGAT CCAGCGCTGC AGCCGCTGGA ATCCCAGCGG TGATGGGCGT GAGCTGTGGG ACAGCTTCAG TGCTGATGGC TCTATCCCTG AAAGCAATAA CGACCGGCGC AGTGGATCGG ATGATCCCCT CAGTGCTGCG CTTGCGGTGC AGTGTCAGTT GGCCCCCGGG CAGAGCATTG AGATCCCGCT GGTGATCAGC TGGGACCTTC CCGTGACGGC CTTTGCCACC GGCAGCCAGG CGCTGCGCCG CTACACCGAC TTCTTCGCTG CGGATGCCAA TCAGGCGGTT GCCATTGCCG CTGAAGCGCT GCGTGACTGG CGCCGTTGGC GCCAGCAGAT CGAGGCCTGG CAGCAGCCGG TGCTGCAACG CCAGGACCTG CCTAAACCGC TGCGGATGGC TCTGTTCAAT GAGCTCTACG ACCTCTGCAG CGGCGGCAGT CTCTGGAGTG CGGCATCACC TGAGGATCCC TACGGCCGCT TCGGTGTTCT CGAGTGCCTC GACTATGCCT GGTACGAAAG CCTCGATGTT CGCCTCTACG GATCCCTGGC CCTGCTCCAG CTCTGGCCCG AACTCGACAA GGCCGTGCTG CGCAGCTTTG CCCGGGCGAT TCCGGCTGCG GACGCCACTC AGCGGCCGAT CGGCTGGTAC TTCACCCAGG GCAAGGGCCG GGTGGAGGCT GATCGCAAGG TGAAAGGAGC CACCCCCCAC GACCTGGGGG CTCCCAACGA GATCCCCTGG GATGCGACCA ACTACACCGC TTATCAGGAC TGCAACCTCT GGAAGGACCT CGGCAGTGAT TTTGTGCTGC AGGTGTGGCG CACCTTCAAG CTCGCCCCCA GTGGTGAAGA CATCCGTTTC CTCGCCGATT GCTGGCCGGC GGCCGTGGAG GCGCTGCGCT ACCTGAAGAC GTTCGATGTA AACAACGACG GCCTGCCCGA CAACGGCGGT GCTCCGGATC AGACCTTCGA CGACTGGCCC CTCAAAGGGG TGAGTGCCTA CTGCGGTGCC CTCTGGATTG CGGCTCTCGA GGCAGCCCTT GCCATTGCTC AGACGCTTCA GCTCAGCACC GGGCTGGACA CCTCCGCTGA GCAAAGGGAA TTCAGCGGTT GGCTGGAACA ATCCCGGGGC AACTTCGACA AGCTGCTCTG GAACGGCGAG TACTACGACA TTGATGCCGA GAGCGGCACG CCGGTGGTGA TGGCCGATCA ACTCTGTGGC GATTTCTATG CACGGCTTTT GGCCCTGCCG CCTGTAGTGA GTGATGCCAA CAGCCTCAGC ACCTTGAAGG CCGTGAAGGA GGCCTGCTTC GAGGCTTTCG ATGGCGGTTC CCTCGGTGTG GCCAACGGCC TGCGCCGCGA TGGCACGCCG TTGGATCCCA ACGCCACCCA CCCGCTTGAG GTGTGGACGG GGATCAACTT CGGGATCGCC AGTTATTACC GCTTGATGGG GGACAAGCAG ACGGCGCAAT CGATCTGCTC AGCGGTTGTC GAGCAGGTGT ATTCCAGCGG TCTGCAGTTC CGCACGCCTG AGGCGATCAC CGCGGTGAAC ACCTACCGGG CTTGCCACTA CCTCAGGGCC ATGGCGATCT GGGGGCTCTG GGCCACGGAG ACCGATTGGA TGCTCATCCC TGGAGCGGAT GCTCGTTGA
|
Protein sequence | MASFGWYALN SLLGRGKQAK RWQPPEASWS RPFGLGWDKP YTVRYASNLD DGPNHGMPLG GFGAGCFGRA PDGNINLWHL DGGEHWFGVL PDCQFALFEG NGRGKRAHAL AVQPEQDASR PEAGQPLKVW EWYPASTPDR STGTYAARYP LSWTSYEGVY DAEVRCEAFS PILPGDYQRT SYPVVVFVWT LRNPTDQPLD LSLLLSWRNT TGWFTNTDAS AEVHFRDDGS PEHNYAPAIG STAGQRNCCI DDGSLKGVLL EGNVSDPVAE GEGQWCIATA EQPGVTIQRC SRWNPSGDGR ELWDSFSADG SIPESNNDRR SGSDDPLSAA LAVQCQLAPG QSIEIPLVIS WDLPVTAFAT GSQALRRYTD FFAADANQAV AIAAEALRDW RRWRQQIEAW QQPVLQRQDL PKPLRMALFN ELYDLCSGGS LWSAASPEDP YGRFGVLECL DYAWYESLDV RLYGSLALLQ LWPELDKAVL RSFARAIPAA DATQRPIGWY FTQGKGRVEA DRKVKGATPH DLGAPNEIPW DATNYTAYQD CNLWKDLGSD FVLQVWRTFK LAPSGEDIRF LADCWPAAVE ALRYLKTFDV NNDGLPDNGG APDQTFDDWP LKGVSAYCGA LWIAALEAAL AIAQTLQLST GLDTSAEQRE FSGWLEQSRG NFDKLLWNGE YYDIDAESGT PVVMADQLCG DFYARLLALP PVVSDANSLS TLKAVKEACF EAFDGGSLGV ANGLRRDGTP LDPNATHPLE VWTGINFGIA SYYRLMGDKQ TAQSICSAVV EQVYSSGLQF RTPEAITAVN TYRACHYLRA MAIWGLWATE TDWMLIPGAD AR
|
| |