Gene Syncc9605_0920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0920 
Symbol 
ID3737556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp885709 
End bp888207 
Gene Length2499 bp 
Protein Length832 aa 
Translation table11 
GC content64% 
IMG OID637775514 
Producthypothetical protein 
Protein accessionYP_381237 
Protein GI78212458 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG4354] Predicted bile acid beta-glucosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.694299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCGT TCGGTTGGTA CGCTCTGAAC TCCCTGCTGG GTCGCGGCAA GCAAGCCAAG 
CGCTGGCAGC CACCGGAGGC CTCCTGGAGC CGACCCTTCG GCCTGGGCTG GGACAAGCCC
TACACGGTTC GCTATGCCAG CAACCTCGAC GACGGCCCCA ACCACGGCAT GCCGCTGGGG
GGCTTCGGCG CTGGCTGCTT CGGGCGGGCG CCCGACGGCA ACATCAACCT CTGGCACCTC
GATGGCGGTG AGCACTGGTT TGGAGTGCTG CCTGATTGCC AGTTCGCCCT GTTTGAAGGG
AATGGTCGCG GCAAGCGCGC CCACGCCCTG GCGGTTCAGC CGGAGCAGGA TGCTTCGCGG
CCGGAGGCTG GCCAGCCGCT GAAGGTCTGG GAGTGGTACC CGGCCAGCAC GCCGGATCGC
AGCACCGGCA CCTACGCCGC CCGTTACCCC CTCAGCTGGA CCAGCTATGA GGGTGTGTAC
GACGCAGAGG TGCGTTGTGA GGCCTTCAGC CCGATCCTGC CGGGTGATTA CCAGCGCACC
AGCTACCCTG TGGTGGTGTT CGTCTGGACG CTGCGCAATC CCACCGACCA ACCTCTGGAT
TTGTCGTTGC TGCTGAGTTG GCGCAACACC ACTGGTTGGT TCACCAACAC CGATGCCTCG
GCGGAGGTTC ACTTCCGCGA TGACGGCAGC CCGGAGCACA ACTACGCCCC GGCCATCGGC
AGCACCGCCG GCCAGCGCAA CTGTTGTATT GACGATGGCT CCCTCAAGGG AGTGTTGCTC
GAAGGCAACG TCTCCGATCC CGTTGCCGAG GGCGAGGGCC AGTGGTGCAT TGCCACAGCC
GAGCAGCCCG GTGTGACGAT CCAGCGCTGC AGCCGCTGGA ATCCCAGCGG TGATGGGCGT
GAGCTGTGGG ACAGCTTCAG TGCTGATGGC TCTATCCCTG AAAGCAATAA CGACCGGCGC
AGTGGATCGG ATGATCCCCT CAGTGCTGCG CTTGCGGTGC AGTGTCAGTT GGCCCCCGGG
CAGAGCATTG AGATCCCGCT GGTGATCAGC TGGGACCTTC CCGTGACGGC CTTTGCCACC
GGCAGCCAGG CGCTGCGCCG CTACACCGAC TTCTTCGCTG CGGATGCCAA TCAGGCGGTT
GCCATTGCCG CTGAAGCGCT GCGTGACTGG CGCCGTTGGC GCCAGCAGAT CGAGGCCTGG
CAGCAGCCGG TGCTGCAACG CCAGGACCTG CCTAAACCGC TGCGGATGGC TCTGTTCAAT
GAGCTCTACG ACCTCTGCAG CGGCGGCAGT CTCTGGAGTG CGGCATCACC TGAGGATCCC
TACGGCCGCT TCGGTGTTCT CGAGTGCCTC GACTATGCCT GGTACGAAAG CCTCGATGTT
CGCCTCTACG GATCCCTGGC CCTGCTCCAG CTCTGGCCCG AACTCGACAA GGCCGTGCTG
CGCAGCTTTG CCCGGGCGAT TCCGGCTGCG GACGCCACTC AGCGGCCGAT CGGCTGGTAC
TTCACCCAGG GCAAGGGCCG GGTGGAGGCT GATCGCAAGG TGAAAGGAGC CACCCCCCAC
GACCTGGGGG CTCCCAACGA GATCCCCTGG GATGCGACCA ACTACACCGC TTATCAGGAC
TGCAACCTCT GGAAGGACCT CGGCAGTGAT TTTGTGCTGC AGGTGTGGCG CACCTTCAAG
CTCGCCCCCA GTGGTGAAGA CATCCGTTTC CTCGCCGATT GCTGGCCGGC GGCCGTGGAG
GCGCTGCGCT ACCTGAAGAC GTTCGATGTA AACAACGACG GCCTGCCCGA CAACGGCGGT
GCTCCGGATC AGACCTTCGA CGACTGGCCC CTCAAAGGGG TGAGTGCCTA CTGCGGTGCC
CTCTGGATTG CGGCTCTCGA GGCAGCCCTT GCCATTGCTC AGACGCTTCA GCTCAGCACC
GGGCTGGACA CCTCCGCTGA GCAAAGGGAA TTCAGCGGTT GGCTGGAACA ATCCCGGGGC
AACTTCGACA AGCTGCTCTG GAACGGCGAG TACTACGACA TTGATGCCGA GAGCGGCACG
CCGGTGGTGA TGGCCGATCA ACTCTGTGGC GATTTCTATG CACGGCTTTT GGCCCTGCCG
CCTGTAGTGA GTGATGCCAA CAGCCTCAGC ACCTTGAAGG CCGTGAAGGA GGCCTGCTTC
GAGGCTTTCG ATGGCGGTTC CCTCGGTGTG GCCAACGGCC TGCGCCGCGA TGGCACGCCG
TTGGATCCCA ACGCCACCCA CCCGCTTGAG GTGTGGACGG GGATCAACTT CGGGATCGCC
AGTTATTACC GCTTGATGGG GGACAAGCAG ACGGCGCAAT CGATCTGCTC AGCGGTTGTC
GAGCAGGTGT ATTCCAGCGG TCTGCAGTTC CGCACGCCTG AGGCGATCAC CGCGGTGAAC
ACCTACCGGG CTTGCCACTA CCTCAGGGCC ATGGCGATCT GGGGGCTCTG GGCCACGGAG
ACCGATTGGA TGCTCATCCC TGGAGCGGAT GCTCGTTGA
 
Protein sequence
MASFGWYALN SLLGRGKQAK RWQPPEASWS RPFGLGWDKP YTVRYASNLD DGPNHGMPLG 
GFGAGCFGRA PDGNINLWHL DGGEHWFGVL PDCQFALFEG NGRGKRAHAL AVQPEQDASR
PEAGQPLKVW EWYPASTPDR STGTYAARYP LSWTSYEGVY DAEVRCEAFS PILPGDYQRT
SYPVVVFVWT LRNPTDQPLD LSLLLSWRNT TGWFTNTDAS AEVHFRDDGS PEHNYAPAIG
STAGQRNCCI DDGSLKGVLL EGNVSDPVAE GEGQWCIATA EQPGVTIQRC SRWNPSGDGR
ELWDSFSADG SIPESNNDRR SGSDDPLSAA LAVQCQLAPG QSIEIPLVIS WDLPVTAFAT
GSQALRRYTD FFAADANQAV AIAAEALRDW RRWRQQIEAW QQPVLQRQDL PKPLRMALFN
ELYDLCSGGS LWSAASPEDP YGRFGVLECL DYAWYESLDV RLYGSLALLQ LWPELDKAVL
RSFARAIPAA DATQRPIGWY FTQGKGRVEA DRKVKGATPH DLGAPNEIPW DATNYTAYQD
CNLWKDLGSD FVLQVWRTFK LAPSGEDIRF LADCWPAAVE ALRYLKTFDV NNDGLPDNGG
APDQTFDDWP LKGVSAYCGA LWIAALEAAL AIAQTLQLST GLDTSAEQRE FSGWLEQSRG
NFDKLLWNGE YYDIDAESGT PVVMADQLCG DFYARLLALP PVVSDANSLS TLKAVKEACF
EAFDGGSLGV ANGLRRDGTP LDPNATHPLE VWTGINFGIA SYYRLMGDKQ TAQSICSAVV
EQVYSSGLQF RTPEAITAVN TYRACHYLRA MAIWGLWATE TDWMLIPGAD AR