Gene Syncc9605_0915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0915 
Symbol 
ID3736117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp881891 
End bp882568 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content64% 
IMG OID637775509 
Producttwo component transcriptional regulator 
Protein accessionYP_381232 
Protein GI78212453 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTG ATCCCTTGTT GCTGTTGGCA GGCTCTTCGG CGGTCGCCCT TGCGCCCCGT 
CTGGCCGCAT CAGGCTACGC AACCCTCGAT TGGCTCAGTG CCGGGCCCTC GGCCCATGCC
GCTGAACCAG GTGAATCCCC TCTGGCTGCT GTGCTGGCGG CCGATCAGAC CGCATTGATT
CAAGACCTGC GCAGCCGTTT TGGGGCCATG CCGATCCTGT TGGATCTGGA ACGCGACAGC
GTTGAGGCCC GCGCCGACTG CCTCGGAACC GGTGCCGATG ATTTCTGGCT CTCGGAGATC
GGGCCCAGCG ATCTGTTGCT GCGTCTGCGC CTGCACCGCA CGATTCAACA GCGCTCGGGG
CAGCGACCGG TGCTGCTTCA GATCGATGAC CTCAGTGTCG ACCCCACCAA CCGGACGGTG
CGGCGGGGAG AACGTGTGGT GGCGTTGACG GCGAGAGAAT TCATGCTGTT GCAGGTGCTG
TTGCGGCGGC GTGGCCAGGT TTTGAGCCGT GAACTGCTGC TTCAGGAGGT GTGGCAGGGG
GAGCGTTCCA GCAGCAATAT TATTGAGGTG TATGTGCGCT ACCTGCGTCA GAAGCTGGAG
GCCGGTGGTG AGCGCCGTTT GCTTCACACC GTGCGCGGCC GGGGGTATTG CCTCGGCCAG
GTGTTGCCGA AGGCTTGA
 
Protein sequence
MNADPLLLLA GSSAVALAPR LAASGYATLD WLSAGPSAHA AEPGESPLAA VLAADQTALI 
QDLRSRFGAM PILLDLERDS VEARADCLGT GADDFWLSEI GPSDLLLRLR LHRTIQQRSG
QRPVLLQIDD LSVDPTNRTV RRGERVVALT AREFMLLQVL LRRRGQVLSR ELLLQEVWQG
ERSSSNIIEV YVRYLRQKLE AGGERRLLHT VRGRGYCLGQ VLPKA