Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0903 |
Symbol | |
ID | 3736105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 870355 |
End bp | 872349 |
Gene Length | 1995 bp |
Protein Length | 664 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637775503 |
Product | NHL repeat-containing protein |
Protein accession | YP_381226 |
Protein GI | 78212447 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.772896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTGGCC AGACCCTCGC CCTCAGTGCG CTGGCGATTG GGACAACAGC AGGGTCTGTC GAAGCTCGAG GGCAATCAAC ATTGAAAGGG GAGATCTCCT TGAAGGGTCA GCCAGTGAGC GGCTCATCCA TCACCCTCTG GCAAACCACA GCAGGGCAAA CTCCCAAACA ACTGAGCACC CAGCGCTCGA ACAAAAGCGG TGCGTTCAGC GTCAAGGTTC GAGCCAGGCA AGGGGTCGTC CACTACCTCG TGGCAAAGGG GGGGGACATC GGGGGATCCA GCGCCGACCA GCTCACCATG CTCACGGTGC TCGGCGGGGA TGAGCATCAG CAGGTGACCA TCAACGAGCT CACCACCGTT GGTTCGGTTT GGCCCAATGC TCAGCTGCTT GAGGGCAACG CTTTGGAAGG AAGCCAAAGC GCCTTGATGA TCGGTTCGAG CCAAGTTGAA AACCTGGTGG ACCAGAGCAC AGGACGGTTT GGAGCAACAT TGCTGAAAAG CACCAACCTG CTGAATTCCG AGACAGCAGC TCGGATGAAT ATGCTCTCAG ATCTAATTGC TTTGTGCGGG CAACCGCAGC AGTCTCAGGC GTGCTATCGG CTGCTAGCAC TGACGAATTC AGAGAACACG CTCTCGGCAA TGACGTCCAT TGCCCGCCAA CCCTGGAAGA ACGCGGGCGC TCTCTATCAC CTGTTCAAAA GCGCATACCC GATCAACAAA TCGACAGAGC TGCGCACAAC TGCAACTGCC CCCTATCTGC TGTTTCAACC CAAAAGCTTT TCCGTGTCCC TGGTTTTCAA CGGTGGCGGT GCTTTAGGGC TCGGGAAGTT GATGTTTGAC GGAAAAGGAA GCCTTTGGAG TGGAACCAAC TGGATGCCGG GATCGCAATC CGGCGTGGTG AACAACATCG GCGGTGGCGT GACCCACTTC AGCCCCGGTG GCACGCCCCT CTCACCAGCA ATTAGCGGTT ACAACGGCCA AGGCATCAAT GGTGTGGGCT GGGGAACCGG CGTCTCAGAA AAATATGCCT GGGTTGGTGC GTTCAACAAC ATGGTCGGGG TGTTCGACCT CAACGATGGC AAAGCTCTCG GGCCAGCCAC CATTGATGGA GAAGTGGGTC AGCTTCAGGG CGTCGCCACA GCCGCCAACG GAGATGTGTG GATTGCCGAC AACACGGCCA ACCACATGAT TCAGTTCCCA GGAGGTGATT ACACCAAGGG GAAGCGCCAC ACTATTGATG GCCTCCAAGC CCCCTTCGGT GTTGCCGTTG ACGCGCAGAA CAGGGTGTGG GTGAGCAGCA GTTACAACAA CAAGCTCACC GTGTTTCCGG GGGATGCTCC TGATCAGGCC AAAACGATCG AAGTGAACCT TGGGGGGCGT GGTGTTGCCG TTGACTCGAC AGGGCATGTA TGGATTGCCC AGCAATCCAA TTCTCCCCAA GGGGCACTAC CTCCCGGCGC GAAAATGCCG CCCAACATCC CCGCCAATGC ACCACAACCC AAGACAATCA TGGAGGAGTT TGAGGCCGGT GCTGAATACC TTCTGACCAA CCCCAACATC ACGCAGACTG GCATGGTTGG GTTGATTTCA CCCGACATGA AAGTCGTCCA ACAAAACATC GCCAAAGGCA CCGCCTATAT CCCCTGGGGC GTTTCCGTCG ACGGCAACGA CAACGTCTGG GTCGGCAATC TCTATGGTCA AAGCTTGACT CACATCTGCG GCGTCAATCC CGCCAATTGC CCCGAAGGGA AAACCACTGG GGATGTGATT CACAACTACC AAAGCGGCGT CATTCAAATG ACCACCGACG TCATTGTTGA TGACGCTGGA AACCTCTGGA GCGCCAACAA TTGGTTCGAC GGTGAAGTGG TCATCAACCC CACCTATCAG GGACGCACCT CCACCTTTGG AGGGGGGCAG GGATTCGTTG TGACCTATGG CGTTGCCGGA CCGGTTCAAA ACCCCCTGAT GGGGCCTGTG CGCAAGCCAC GCTGA
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Protein sequence | MLGQTLALSA LAIGTTAGSV EARGQSTLKG EISLKGQPVS GSSITLWQTT AGQTPKQLST QRSNKSGAFS VKVRARQGVV HYLVAKGGDI GGSSADQLTM LTVLGGDEHQ QVTINELTTV GSVWPNAQLL EGNALEGSQS ALMIGSSQVE NLVDQSTGRF GATLLKSTNL LNSETAARMN MLSDLIALCG QPQQSQACYR LLALTNSENT LSAMTSIARQ PWKNAGALYH LFKSAYPINK STELRTTATA PYLLFQPKSF SVSLVFNGGG ALGLGKLMFD GKGSLWSGTN WMPGSQSGVV NNIGGGVTHF SPGGTPLSPA ISGYNGQGIN GVGWGTGVSE KYAWVGAFNN MVGVFDLNDG KALGPATIDG EVGQLQGVAT AANGDVWIAD NTANHMIQFP GGDYTKGKRH TIDGLQAPFG VAVDAQNRVW VSSSYNNKLT VFPGDAPDQA KTIEVNLGGR GVAVDSTGHV WIAQQSNSPQ GALPPGAKMP PNIPANAPQP KTIMEEFEAG AEYLLTNPNI TQTGMVGLIS PDMKVVQQNI AKGTAYIPWG VSVDGNDNVW VGNLYGQSLT HICGVNPANC PEGKTTGDVI HNYQSGVIQM TTDVIVDDAG NLWSANNWFD GEVVINPTYQ GRTSTFGGGQ GFVVTYGVAG PVQNPLMGPV RKPR
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