Gene Syncc9605_0903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0903 
Symbol 
ID3736105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp870355 
End bp872349 
Gene Length1995 bp 
Protein Length664 aa 
Translation table11 
GC content57% 
IMG OID637775503 
ProductNHL repeat-containing protein 
Protein accessionYP_381226 
Protein GI78212447 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.772896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGGCC AGACCCTCGC CCTCAGTGCG CTGGCGATTG GGACAACAGC AGGGTCTGTC 
GAAGCTCGAG GGCAATCAAC ATTGAAAGGG GAGATCTCCT TGAAGGGTCA GCCAGTGAGC
GGCTCATCCA TCACCCTCTG GCAAACCACA GCAGGGCAAA CTCCCAAACA ACTGAGCACC
CAGCGCTCGA ACAAAAGCGG TGCGTTCAGC GTCAAGGTTC GAGCCAGGCA AGGGGTCGTC
CACTACCTCG TGGCAAAGGG GGGGGACATC GGGGGATCCA GCGCCGACCA GCTCACCATG
CTCACGGTGC TCGGCGGGGA TGAGCATCAG CAGGTGACCA TCAACGAGCT CACCACCGTT
GGTTCGGTTT GGCCCAATGC TCAGCTGCTT GAGGGCAACG CTTTGGAAGG AAGCCAAAGC
GCCTTGATGA TCGGTTCGAG CCAAGTTGAA AACCTGGTGG ACCAGAGCAC AGGACGGTTT
GGAGCAACAT TGCTGAAAAG CACCAACCTG CTGAATTCCG AGACAGCAGC TCGGATGAAT
ATGCTCTCAG ATCTAATTGC TTTGTGCGGG CAACCGCAGC AGTCTCAGGC GTGCTATCGG
CTGCTAGCAC TGACGAATTC AGAGAACACG CTCTCGGCAA TGACGTCCAT TGCCCGCCAA
CCCTGGAAGA ACGCGGGCGC TCTCTATCAC CTGTTCAAAA GCGCATACCC GATCAACAAA
TCGACAGAGC TGCGCACAAC TGCAACTGCC CCCTATCTGC TGTTTCAACC CAAAAGCTTT
TCCGTGTCCC TGGTTTTCAA CGGTGGCGGT GCTTTAGGGC TCGGGAAGTT GATGTTTGAC
GGAAAAGGAA GCCTTTGGAG TGGAACCAAC TGGATGCCGG GATCGCAATC CGGCGTGGTG
AACAACATCG GCGGTGGCGT GACCCACTTC AGCCCCGGTG GCACGCCCCT CTCACCAGCA
ATTAGCGGTT ACAACGGCCA AGGCATCAAT GGTGTGGGCT GGGGAACCGG CGTCTCAGAA
AAATATGCCT GGGTTGGTGC GTTCAACAAC ATGGTCGGGG TGTTCGACCT CAACGATGGC
AAAGCTCTCG GGCCAGCCAC CATTGATGGA GAAGTGGGTC AGCTTCAGGG CGTCGCCACA
GCCGCCAACG GAGATGTGTG GATTGCCGAC AACACGGCCA ACCACATGAT TCAGTTCCCA
GGAGGTGATT ACACCAAGGG GAAGCGCCAC ACTATTGATG GCCTCCAAGC CCCCTTCGGT
GTTGCCGTTG ACGCGCAGAA CAGGGTGTGG GTGAGCAGCA GTTACAACAA CAAGCTCACC
GTGTTTCCGG GGGATGCTCC TGATCAGGCC AAAACGATCG AAGTGAACCT TGGGGGGCGT
GGTGTTGCCG TTGACTCGAC AGGGCATGTA TGGATTGCCC AGCAATCCAA TTCTCCCCAA
GGGGCACTAC CTCCCGGCGC GAAAATGCCG CCCAACATCC CCGCCAATGC ACCACAACCC
AAGACAATCA TGGAGGAGTT TGAGGCCGGT GCTGAATACC TTCTGACCAA CCCCAACATC
ACGCAGACTG GCATGGTTGG GTTGATTTCA CCCGACATGA AAGTCGTCCA ACAAAACATC
GCCAAAGGCA CCGCCTATAT CCCCTGGGGC GTTTCCGTCG ACGGCAACGA CAACGTCTGG
GTCGGCAATC TCTATGGTCA AAGCTTGACT CACATCTGCG GCGTCAATCC CGCCAATTGC
CCCGAAGGGA AAACCACTGG GGATGTGATT CACAACTACC AAAGCGGCGT CATTCAAATG
ACCACCGACG TCATTGTTGA TGACGCTGGA AACCTCTGGA GCGCCAACAA TTGGTTCGAC
GGTGAAGTGG TCATCAACCC CACCTATCAG GGACGCACCT CCACCTTTGG AGGGGGGCAG
GGATTCGTTG TGACCTATGG CGTTGCCGGA CCGGTTCAAA ACCCCCTGAT GGGGCCTGTG
CGCAAGCCAC GCTGA
 
Protein sequence
MLGQTLALSA LAIGTTAGSV EARGQSTLKG EISLKGQPVS GSSITLWQTT AGQTPKQLST 
QRSNKSGAFS VKVRARQGVV HYLVAKGGDI GGSSADQLTM LTVLGGDEHQ QVTINELTTV
GSVWPNAQLL EGNALEGSQS ALMIGSSQVE NLVDQSTGRF GATLLKSTNL LNSETAARMN
MLSDLIALCG QPQQSQACYR LLALTNSENT LSAMTSIARQ PWKNAGALYH LFKSAYPINK
STELRTTATA PYLLFQPKSF SVSLVFNGGG ALGLGKLMFD GKGSLWSGTN WMPGSQSGVV
NNIGGGVTHF SPGGTPLSPA ISGYNGQGIN GVGWGTGVSE KYAWVGAFNN MVGVFDLNDG
KALGPATIDG EVGQLQGVAT AANGDVWIAD NTANHMIQFP GGDYTKGKRH TIDGLQAPFG
VAVDAQNRVW VSSSYNNKLT VFPGDAPDQA KTIEVNLGGR GVAVDSTGHV WIAQQSNSPQ
GALPPGAKMP PNIPANAPQP KTIMEEFEAG AEYLLTNPNI TQTGMVGLIS PDMKVVQQNI
AKGTAYIPWG VSVDGNDNVW VGNLYGQSLT HICGVNPANC PEGKTTGDVI HNYQSGVIQM
TTDVIVDDAG NLWSANNWFD GEVVINPTYQ GRTSTFGGGQ GFVVTYGVAG PVQNPLMGPV
RKPR