Gene Syncc9605_0813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0813 
Symbol 
ID3735375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp776587 
End bp778362 
Gene Length1776 bp 
Protein Length591 aa 
Translation table11 
GC content66% 
IMG OID637775409 
ProductComEC/Rec2-related protein 
Protein accessionYP_381136 
Protein GI78212357 
COG category[R] General function prediction only 
COG ID[COG0658] Predicted membrane metal-binding protein 
TIGRFAM ID[TIGR00360] ComEC/Rec2-related protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.56111 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00293052 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCGCCTG CGGCTGTGGC GATCAGCGGT CGCTTGCTCG CTGATGTGCG CCGTTTTCCC 
TCGGGATGTT CTGCTCTGCT GGAGGTGGAT TGGATCGAGG CTCGCCGGGT CGATGGACGA
ACCGAGCTCC AGCTGCCTGC CTGCTCTGCG CCGTTGCAGC AGGGCTGGCG AGTCCAGGCC
ATAGGGGTGC TGAGGCGTCC GCTGCCAGCG GCGCACCCGC TGTTGCCGGG ATCGGCAGAA
CGTCTGGCTC GTCAAGGCAG TTGGAGTCAG CTGCGGGTCG AGAGCATCGA GGTGCTGCAG
CGTCCATGGA CGCCATTGGC TGATCTGCGG CGCGATGTTG CCCAGCGACT GCAAAAGATT
GTCGGGCCGC GGCGGGGTGG TTTCTTGGCC GCCCTGGTGC TGGGCAGCGC CCAGGTGCAG
CTCTCCGCAG ACATCCGAGA GGCGTTCCGG ATGGCCGGTT TATCTCATGC CCTTGCGGCA
TCGGGGTTTC ACCTCTCCGT TCTGCTCGGC ACTGTGCTGA TGTTGGCTCG CCGCTGGCCG
CCTGGCCTGA GGCTTCCCCT GGCGGCCATG GCGCTGCTGC TGTTTGTCTG TCTCGCCGGA
GCCCAGCCAT CGGTGGTGCG GGCGGTGCTG ATGGCTGCGA TGGCCTTGCT GATTCGTGAG
GCAGGGCATC ACAGCCGTCC CCTGGGGGTG GTGGTGCTGA CGCTCAGCGG CATGTTGCTG
TTGCGCCCGG CCTGGGCCCT ATCGATTGGT TTTCAACTCA GTGCGGCGGC CACCGCTGGG
CTGATCCTCA CGGCTCCCCG CCTCGAGCGG GCTGTTCAGG CGTGGTTGCC GGATCGCTGC
CAGGGGCTGG CAGCGGCGTG CTCCATTCCT CTGGCGGCGC TGGTCTGGAC GCTGCCGCTC
CAGTTGCTCC ACTTCGGTGC AATGCCGTTG TACGCCCTGG TTGCCAATCT TCTCGTTGCC
CCGCTGCTGG CGCCGCTCAC GCTGCTCGCC ATGCTCTCGG CGTTGTTGGT GCTCGTGGGG
CCTCCGGCTG TGCTGCCCCT GCTGCTGTGG CCCGTTCATC AGTTGACGGG CCTGGTGATC
ACCATGGCCA GCTGGATCAG CCACTGGCCT GGTGCACAAC TGCTCACCGG CCGGCCCCAA
GAGTGGGTGA TTGCCCTGTT TGTGCTTGGA CTGTTGCCTT GGTGGCTGGG GGCAGGGCCT
TGCCGCCGGT GCTGGTCGTT GATCCCCCTG GCAATCGCCC TGTTTGCCCA TGGCCTGCTT
CAGCTCGGCG ATGGCCTGGT GGCGGTGGAG CGGTTCGGTC GCCACTGGTT GCTGGCTCGC
CATCGTGGGC GTGCCGCGCT GGTGAGCACC CATGGAGATG CGCGCAGTTG CCGAATGGCG
AAGAGACATG CCGCCGTGCA CGGCCACGCC CGTCTGGACT GGGTGATGCT CTTGGATCCT
GTGGCCACAG AGGTGATGGC CTGTTGGCAA GCGTTGGCGC ACTGCGTTGA GGCTCCCCAG
CAAGGCCAAG CTCCCATCTC CATCGGCCAG GTGCTTCGGA GTGATGGCTT ATCGGTGCAG
CACCTCCAGC ATCGCTCTGG AGCACTGTTG ATGCGGGTGG GTCCTCAGCG CTGGCAACTG
TTCCCAAGCC CTCAGGCCTT GTGGGCACTG CAGCATCGGC AGCGATCAAA ACCCCAGCAG
ATGATCACCG GAACATGGCT GGGCTTCAAG CCTTCCGCAC CACAGCGGCG TTGGCTTCTG
AAGCATGGAG CTGGCTCGCG GTTCATCGGC CTTTAA
 
Protein sequence
MPPAAVAISG RLLADVRRFP SGCSALLEVD WIEARRVDGR TELQLPACSA PLQQGWRVQA 
IGVLRRPLPA AHPLLPGSAE RLARQGSWSQ LRVESIEVLQ RPWTPLADLR RDVAQRLQKI
VGPRRGGFLA ALVLGSAQVQ LSADIREAFR MAGLSHALAA SGFHLSVLLG TVLMLARRWP
PGLRLPLAAM ALLLFVCLAG AQPSVVRAVL MAAMALLIRE AGHHSRPLGV VVLTLSGMLL
LRPAWALSIG FQLSAAATAG LILTAPRLER AVQAWLPDRC QGLAAACSIP LAALVWTLPL
QLLHFGAMPL YALVANLLVA PLLAPLTLLA MLSALLVLVG PPAVLPLLLW PVHQLTGLVI
TMASWISHWP GAQLLTGRPQ EWVIALFVLG LLPWWLGAGP CRRCWSLIPL AIALFAHGLL
QLGDGLVAVE RFGRHWLLAR HRGRAALVST HGDARSCRMA KRHAAVHGHA RLDWVMLLDP
VATEVMACWQ ALAHCVEAPQ QGQAPISIGQ VLRSDGLSVQ HLQHRSGALL MRVGPQRWQL
FPSPQALWAL QHRQRSKPQQ MITGTWLGFK PSAPQRRWLL KHGAGSRFIG L