Gene Syncc9605_0806 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0806 
Symbol 
ID3737317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp771283 
End bp772236 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content61% 
IMG OID637775402 
Productbacteriochlorophyll/chlorophyll a synthase 
Protein accessionYP_381129 
Protein GI78212350 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01476] bacteriochlorophyll/chlorophyll synthetase
[TIGR02056] chlorophyll synthase, ChlG 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.196063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00946917 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCGACG CGCGTCAGCT GCTTGGGATG AAAGGTGCCT CAGGCACCAC CAACATCTGG 
AAGCTGCGGC TGCAGCTGAT GAAACCGGTC ACCTGGATCC CCTTGATCTG GGGTGTCATC
TGTGGTGCCG CAGCCAGCGG TAATTACGAG TGGCGTTTGG ACCACGTGCT CGCGGCCTTC
GCCTGCATGT TGATGAGCGG CCCCTTGCTG GCGGGCTTCA CCCAGACCAT AAACGACTAT
TACGACCGCG AGATCGACGC GATCAACGAG CCCTACCGGC CGATCCCCTC GGGAGCGATT
CCCCTGGGCC AGGTCAAGCT GCAGATCTGG GTTCTGCTGC TTGCGGGTTT GGGCGTGTCC
TACGGCCTCG ACCAGTGGGC CGGCCACTCC ACGCCTGTGG TTTTTCTGCT GGCGTTGGGA
GGCTCCTTTG TGAGCTACAT CTATTCAGCA CCCCCGCTGA AGCTCAAGCA GAACGGTTGG
CTGGGCAACT ATGCCCTCGG TGCCAGCTAC ATCGCTCTTC CCTGGTGGGC CGGCCAGGCC
CTGTTCGGGC AGCTGACCTG GGGCACAGCA CTGCTCACCC TGGCCTACAG CCTTGCGGGC
CTTGGCATTG CTGTGGTCAA CGACTTCAAG AGCGTTGAGG GCGACCGAGA ACTGGGACTT
CAATCCTTGC CTGTTGTGTT CGGCATCGAA CGGGCCAGCT GGATCAGCGC CGCAATGATC
GATGTTTTTC AGCTTGCGAT GGTTGCCGTC CTGATCGGGA TCGGCCAGCA TTTCGCAGCG
GTTCTGCTGG TGCTCTTGAT CGTTCCTCAG ATCACCTTCC AGGACATCTG GTTGCTGCGA
GACCCCGTGG CTTTTGACGT GAAATATCAG GCCAGCGCTC AGCCCTTTCT GGTGCTCGGC
ATGTTGGTGA CCGCTCTGGC CGTGGGCCAC AGCCCCTTGA CCCAGGTGAT GTGA
 
Protein sequence
MSDARQLLGM KGASGTTNIW KLRLQLMKPV TWIPLIWGVI CGAAASGNYE WRLDHVLAAF 
ACMLMSGPLL AGFTQTINDY YDREIDAINE PYRPIPSGAI PLGQVKLQIW VLLLAGLGVS
YGLDQWAGHS TPVVFLLALG GSFVSYIYSA PPLKLKQNGW LGNYALGASY IALPWWAGQA
LFGQLTWGTA LLTLAYSLAG LGIAVVNDFK SVEGDRELGL QSLPVVFGIE RASWISAAMI
DVFQLAMVAV LIGIGQHFAA VLLVLLIVPQ ITFQDIWLLR DPVAFDVKYQ ASAQPFLVLG
MLVTALAVGH SPLTQVM