Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0799 |
Symbol | |
ID | 3737310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | + |
Start bp | 763332 |
End bp | 765152 |
Gene Length | 1821 bp |
Protein Length | 606 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637775395 |
Product | GTP-binding protein LepA |
Protein accession | YP_381122 |
Protein GI | 78212343 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0481] Membrane GTPase LepA |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.274116 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0311101 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACG CCCCCGTCTC ACGGATCCGC AACTTCTGCA TCATTGCCCA CATCGACCAC GGCAAGTCGA CCCTGGCCGA CCGCTTGCTG CAGGACACGG GCACCGTGGC CAACCGGGAC ATGCAGGACC AGTTCCTGGA CAACATGGAC CTGGAGCGGG AGCGGGGGAT CACGATCAAG CTCCAGGCCG CCCGGATGAA CTACACGGCG GCACATGGTG AGGAGTACGT CCTCAACCTG ATAGATACCC CTGGCCACGT CGATTTCTCC TATGAGGTGA GCCGCAGCCT TCAAGCTTGT GAAGGGGCGT TACTGGTGGT TGATGCCAGC CAGGGAGTGG AAGCTCAGAC CCTGGCCAAC GTGTATCTGG CGTTGGACAA CGATCTCGAG ATCATTCCGG TGCTCAACAA GATCGATCTC CCCGGTGCGG ATCCGGATCG GATCAAGGAG GAAGTGGAGG CGATCATCGG CCTCGATTGC GATAACGCCA TTCCTTGCTC AGCCAAGACC GGCCTGGGGG TGCCTGAGAT CCTTCAGGCC GTGGTGGACC GGGTGCCCCC GCCGAAGGAT GCAGTTGAAG AACCCACCAA GGCGCTGATC TTCGATTCCT ATTACGACCC CTACCGGGGT GTGATCGTCT ACTTCCGGGT GATGAGCGGC CGGATCAACT GCAAAGACAA GGTGCTGTTG ATGGCCAGCA AGAAGACCTA TGAGCTCGAT GAGATCGGGA TCATGGCGCC GGATCAGAAG AAGGTGGATG AGCTCCATGC CGGTGAGGTG GGCTACTTAG CGGCGTCGAT TAAGGCCGTG GCAGATGCTC GTGTCGGCGA CACGATCACC CTGGTGAACG CACCGGCGGA TGAGGCCCTC CCCGGTTACA CCGAGGCCAA GCCGATGGTG TTCTGCGGTT TGTTTCCCAC CGAGGCCGAC CAGTACCCGG ATCTGCGCGA TGCGCTCGAC AAGCTGCAGC TTTCGGATGC GGCGCTGAAG TACGAGCCGG AAACAAGCAG CGCCATGGGC TTTGGCTTCC GCTGCGGCTT CTTGGGCCTC CTGCACATGG AGATCGTGCA GGAGCGGCTC GAACGCGAGT ACGACCTTGA TCTGATCGTC ACCGCGCCAT CGGTGATCTA CAAGGTGAAC ATGATCGATG GCTCAGAGGT GATGGTGGAC AACCCCGCCA CACTTCCGGA TCCCCAGAAG CGCGAGTCGA TCGAAGAGCC CTATGTGCGC ATGGAGATTT ACGCACCGAA TGAGTACAAC GGTGCGCTGA TGGGGCTTTG CCAGGAACGG CGTGGCGATT ACATCGACAT GAAGTACATC ACAACCGATC GGGTGACGCT GATCTATGAA CTACCGCTAG CCGAAGTGGT GACCGACTTC TTCGATCAGA TGAAGACGCG CACCCAGGGC TATGCCTCGA TGGAATACAG CCTGATCGGC TACCGCAAGA ACCAGCTGGT GCGCCTGGAT GTGTTGATCA ATGGCGAGCG GGCCGATGCG CTCACCACGA TTGTTCATCA AGACAAGGCC TACAACGTGG GCAAGGCCTT GGTGGAGAAA CTCAAGGAAC TGATTCCCCG ACAGCAGTTC AAGATTCCGA TTCAGGCATC GATCGGTAGC CGAATCATTG CTTCCACCAG CATCAGTGCC ATCCGTAAGG ATGTGCTCGC CAAGTGCTAT GGCGGTGACA TCTCCAGGAA GAAGAAACTG CTGAAGAAGC AGGCCAAGGG CAAGAAGCGG ATGAAGGCCA TGGGCAAGGT GGATGTGCCT CAAGAGGCCT TCATGGCGGT GCTTAAGTTG AATGATGGAG GGGGCAGTTG A
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Protein sequence | MTDAPVSRIR NFCIIAHIDH GKSTLADRLL QDTGTVANRD MQDQFLDNMD LERERGITIK LQAARMNYTA AHGEEYVLNL IDTPGHVDFS YEVSRSLQAC EGALLVVDAS QGVEAQTLAN VYLALDNDLE IIPVLNKIDL PGADPDRIKE EVEAIIGLDC DNAIPCSAKT GLGVPEILQA VVDRVPPPKD AVEEPTKALI FDSYYDPYRG VIVYFRVMSG RINCKDKVLL MASKKTYELD EIGIMAPDQK KVDELHAGEV GYLAASIKAV ADARVGDTIT LVNAPADEAL PGYTEAKPMV FCGLFPTEAD QYPDLRDALD KLQLSDAALK YEPETSSAMG FGFRCGFLGL LHMEIVQERL EREYDLDLIV TAPSVIYKVN MIDGSEVMVD NPATLPDPQK RESIEEPYVR MEIYAPNEYN GALMGLCQER RGDYIDMKYI TTDRVTLIYE LPLAEVVTDF FDQMKTRTQG YASMEYSLIG YRKNQLVRLD VLINGERADA LTTIVHQDKA YNVGKALVEK LKELIPRQQF KIPIQASIGS RIIASTSISA IRKDVLAKCY GGDISRKKKL LKKQAKGKKR MKAMGKVDVP QEAFMAVLKL NDGGGS
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