Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0792 |
Symbol | |
ID | 3737303 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 757162 |
End bp | 757884 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637775388 |
Product | hypothetical protein |
Protein accession | YP_381115 |
Protein GI | 78212336 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2203] FOG: GAF domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.327217 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0268431 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGCCG CACCCAAGCC GATCAACGAA GCAGCCAGGC TGAGGTCCCT CAGTGAATAC CGGATTCTGG GAACAAAGCC TGAGAAAGCC TTTGACAACA TCACCCGGAT GGCGTCAGAG ATCTGCCAAT CTCCGATTGC GCTGATCTCT TTGGTGGACG AGAAGCGTCA GTGGTTCAAA TCGAAGGTGG GCCTTGAGGC CAGCGAAACC GACCGGGATA TCTCCTTCTG TGCCCATACG ATCCTCGATT CCAAACCTCT TGTGGTGGAG GACGCACTGT TTCACGAGAA ATTCCGCGAC AACCCCCTTG TTCAGGAAGA ACCCCACATC CGGCTCTATG CAGGCTTCCC CCTCAAAACC GACATCAACC ACCGCATTGG AACGCTTTGC GTGATTGATC GGATTCCCAA ATCGCTCACC AATTCGCAAT ACAAGGTGAT GGAAGGCCTG GCGGAACAGG CCACCACCCT GTTGGAACTC AGACGCCGAT CCCTAGCCCT CATGGATGAG TTCTGCCAGA TGCATCATGC TCAGGGCTTA ATCACCACCT GCAGCTACTG CAAGTCGATC CGCGACAGCG AAGGCTTCTG GCAACCGATC GAACGATTCC TAATGCAGCA CAGCACGCTG AATTTCAGCC ATGGCATCTG TCCCGAATGC ATGAACGAGC ACTTCCCCGA CGTGCAAAAC AGTCGAGCGG AGTCGTTGAA CGATCAAAGT TGA
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Protein sequence | MQAAPKPINE AARLRSLSEY RILGTKPEKA FDNITRMASE ICQSPIALIS LVDEKRQWFK SKVGLEASET DRDISFCAHT ILDSKPLVVE DALFHEKFRD NPLVQEEPHI RLYAGFPLKT DINHRIGTLC VIDRIPKSLT NSQYKVMEGL AEQATTLLEL RRRSLALMDE FCQMHHAQGL ITTCSYCKSI RDSEGFWQPI ERFLMQHSTL NFSHGICPEC MNEHFPDVQN SRAESLNDQS
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