Gene Syncc9605_0790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0790 
SymbolmurE 
ID3736561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp753755 
End bp755260 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content65% 
IMG OID637775386 
ProductUDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 
Protein accessionYP_381113 
Protein GI78212334 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase 
TIGRFAM ID[TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0329673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGG CGTTGCATGC CCTGTTGAGT GATGCAGGCA TCGCAGTGCC GCCGGGGCTG 
GTGAACCCTG GGTTGGGGGC GATCACCACC GATTCCCGCC GCGTCGGCCC TGGAACTCTG
TTTCTCGGTC TCCCCGGCGA ACGGGTGGAT GGAGGCACCT TCTGGGCCCA AGCCCTTGAG
GCCGGTGCTG CCGCTGCTGT GATTGGAGCT GAAGCTGCTG CAGCACAACC GCCTGGCGCG
GATGCCCCTG TGGTGGTGAT CCAGGAGCCG GTGGCGCGTC GAATCGGTGA GATTGCCGCG
GCGTTTTGGG ATCACCCCTG CAGGTGCATG GCCCTGATTG GTGTGACCGG CACCAATGGC
AAAACCACCA CCACCCATTT GATCGAGCAT CTGGCCGCTT CGGCCGGCCA ATCCGTGGGC
CTTTTCGGCA CGTTGGTGAA CCGCTGGCCC GGCCAAAGCA TCACGGCTAC CCACACCACG
GCCTTTGCCG ACCTCCTGCA GGGGCAACTC GCCGAGGCTG CCTCCGCCGG TTGCGGCCTG
GCGGCCATGG AGGTGAGTTC CCACGCCCTG GCGCAGCAGC GCGTGGCGGG CTGCCGCTTC
GCAGGAGCCG TGTTCACCAA CCTCACCCAG GACCACCTCG ATTACCACGC CTCCATGGAG
GACTACTTCG AGGCCAAGGC GTCGCTGTTT GCGGATCCTC TGCTGCTTGC CGATGGCGCG
CGATCGGTGG TCAACAGCGA TGACCCCTGG GGGGAACGCC TGGCCGAACG GCTCGGTGCC
GCCTGTTGGC GCAGCTCGCT GGAGGATCCA TCGGCTGAGT TGCACATGAG CGACCTGCAG
ATGACGGCTG CTGGGGTGGA GGGCCGCTTG ATCAGTCCTG TGGGTGAGGG CCGTTTCCGT
TCGCCCTTGC TGGGGCGCTT CAACCTGATG AACCTGTTGC AGGCGATAGG GGTGCTGCTT
CAGCAGCAGT TGCCCTTGCC GGTGCTGCTG GAGGCCATCG GCCGTTTCGG TGGCGTGCCC
GGACGGATGG AGCGGGTGAT TTTGAACGGG GTGGATGCAG CGAATTTGCC CCCGGTGCTG
GTGGATTACG CCCACACTCC CGATGGTCTG GACAATGCTC TTTCTGCAGC GCGTCCGTTC
TGCGCGGGCC GGCTGATCTG TGTGTTCGGT TGCGGTGGTG ATCGGGACCG GGGCAAGCGT
CCGCAGATGG CGGAAATTGC GGCACGCCTG GCTGACCGTG TGGTGGTCAC CTCCGACAAC
CCCCGCACCG AGGATCCTCG GCAGATCCTG GATGACGTTG TTGCCGGGAT TCCGCCCGGT
AGCGATCTGC TGGTGGAGGG TGATCGAGCC CAGGCGATTG CTTCAGCCAT TGCCGAAGCT
GAGCCGAACG ATCTGGTGCT GGTGGCCGGC AAGGGGCACG AGGATTACCA GATTCTCGGC
ACCGAAAAAG TGCACTTCGA CGATCGCGAG GAAGCGGAAC GCGCTTTGCG CTTGAGGTTG
TCTTGA
 
Protein sequence
MTQALHALLS DAGIAVPPGL VNPGLGAITT DSRRVGPGTL FLGLPGERVD GGTFWAQALE 
AGAAAAVIGA EAAAAQPPGA DAPVVVIQEP VARRIGEIAA AFWDHPCRCM ALIGVTGTNG
KTTTTHLIEH LAASAGQSVG LFGTLVNRWP GQSITATHTT AFADLLQGQL AEAASAGCGL
AAMEVSSHAL AQQRVAGCRF AGAVFTNLTQ DHLDYHASME DYFEAKASLF ADPLLLADGA
RSVVNSDDPW GERLAERLGA ACWRSSLEDP SAELHMSDLQ MTAAGVEGRL ISPVGEGRFR
SPLLGRFNLM NLLQAIGVLL QQQLPLPVLL EAIGRFGGVP GRMERVILNG VDAANLPPVL
VDYAHTPDGL DNALSAARPF CAGRLICVFG CGGDRDRGKR PQMAEIAARL ADRVVVTSDN
PRTEDPRQIL DDVVAGIPPG SDLLVEGDRA QAIASAIAEA EPNDLVLVAG KGHEDYQILG
TEKVHFDDRE EAERALRLRL S