| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0787 |
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| Symbol | rpsD |
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| ID | 3736558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | - |
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| Start bp | 752484 |
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| End bp | 753092 |
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| Gene Length | 609 bp |
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| Protein Length | 202 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637775383 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_381110 |
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| Protein GI | 78212331 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0281678 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTCGTT ACCGCGGCCC TCGCCTGAGG ATCACGCGGC GCTTGGGAGA CCTCCCCGGT
CTCACCCGGA AGGCCGCCAA ACGGTCCTAT CCCCCCGGTC AGCACGGCCA AGCCCGTCGC
AAGCGCTCTG AATACGCGAT CCGTCTCGAA GAGAAGCAGA AGCTTCGCTT CAACTACGGC
GTCTCCGAGC GTCAGCTCGT GCGCTACGTG AAGAAAGCGC GCGCCCAGGA AGGTTCCACC
GGAACCAACC TGCTCAAGCT GCTCGAGAAC CGTCTGGACA ATGTTTGTTT CCGCCTCGGC
TTCGGTCCAA CCGTGCCCGG CGCCCGTCAG CTGGTGAACC ATGGTCACGT CACCGTGAAC
GGTCGTGTTA CCGACATCGC CAGCTACCAG TGCAAGCCCG GCGATGTGAT CGCCATCCGC
GAGCGCAAGT GCAGCAAGAA GCTGGCTGAA GCCAACCTCG AGTTCCCTGG TCTGGCCAAC
GTACCCAGCC ACCTCGAACT GGACAAGTCC AAGCTGAGCG CCAAGGTCAC CGCCCGCTGC
GAACGCGAGT GGGTTGCCCT GGAAATCAAC GAATTGCTGG TGGTGGAGTA CTACTCCCGC
AAAGTTTAA
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| Protein sequence | MSRYRGPRLR ITRRLGDLPG LTRKAAKRSY PPGQHGQARR KRSEYAIRLE EKQKLRFNYG
VSERQLVRYV KKARAQEGST GTNLLKLLEN RLDNVCFRLG FGPTVPGARQ LVNHGHVTVN
GRVTDIASYQ CKPGDVIAIR ERKCSKKLAE ANLEFPGLAN VPSHLELDKS KLSAKVTARC
EREWVALEIN ELLVVEYYSR KV
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