Gene Syncc9605_0758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0758 
Symbol 
ID3737597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp723476 
End bp724012 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content67% 
IMG OID637775355 
Productcarbon dioxide concentrating mechanism protein CcmK 
Protein accessionYP_381082 
Protein GI78212303 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.531252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.131519 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACTC CTTCCCCCGC CCCCCGTCGT CGCACCACCC GCAGCACCGC CGCGGCAAAC 
AAGACCGTGG ATGTGAAGCC TGTGGCCAGC ACCCCTGCTC CCGCGTCGAC TCCCGCCAAG
GCAGCTCCTG CTTCAACCAC CCGTCGCGCG TCCACCACAA CGCGCCGCAG CAGCGCTTCC
AACACTGGAT CCGGCGGCGG CTCAGCCGTG ACCAAGCCCG CTGCTACTCC TTCCCCCATC
GTTCCCGGTG TGGCGCTGGG CATGATCGAA ACCCGCGGCA TGGTTCCTGC CATTGAGGCA
GCCGATGCGA TGACCAAGGC TGCTGAGGTG AGCCTGATCT GCCGTGAGTA CGTGGGTGGT
GGCTACGTCA CGGTGATGGT GCGTGGCGAA ACCGGTGCGG TGAATGCCGC TGTTCGTGCC
GGTGCCGATG CCTGCGAGCG CGTGGGCGAC GGCCTCGTAG CTGCTCACAT CATTGCCCGT
CCCCATAAAG AGGTGGAGCC GGTGTTGGCT GGCAGTGGTG CAGCTCGCCG CAGCTGA
 
Protein sequence
MATPSPAPRR RTTRSTAAAN KTVDVKPVAS TPAPASTPAK AAPASTTRRA STTTRRSSAS 
NTGSGGGSAV TKPAATPSPI VPGVALGMIE TRGMVPAIEA ADAMTKAAEV SLICREYVGG
GYVTVMVRGE TGAVNAAVRA GADACERVGD GLVAAHIIAR PHKEVEPVLA GSGAARRS