| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0702 |
|---|
| Symbol | |
|---|
| ID | 3735844 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 671397 |
|---|
| End bp | 672659 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637775304 |
|---|
| Product | membrane associated protease |
|---|
| Protein accession | YP_381031 |
|---|
| Protein GI | 78212252 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1266] Predicted metal-dependent membrane protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCAGTT CCCCACAACC GGTTTCCCCG CGCTGGAAGG GACTTCTGGC GGCCTTGTCC
CTCGCTTTGG CCGGTTTTAT CTGGTTGTCC GGCTTGATTG ACAGCCTCTC GCGACCTTCG
GTGGCACCGG CCCTGAGCCT TCAGCAGCAG GAGCTGACAC TTCTGGCCGA ACCAGCAGTG
CCGCCCCCGC TGCGGGAGGC CCTCCTGGGG GAGGCGCCGC GGGAGGCGCT GCGCAAGGCC
CTTGAGGGAA TCAGCGCAGA AGAGCGCACT GAACGGCAGC AACAAATGTT CCTGTTGTTG
CAAGGGCAAG GTTCCGCATC AGCGGATCTC GAACGCGGTG GCGACGATCC TTTGCTCCAG
CAGCTCCAGT GCGAAGCAGG CGCCGCTGAT CCGACGCTCT GCATCGATGC TGCAGCCGCG
GGGCAAGCGG CGTTCCGTTT GGCCCTCAGC ACGGTGCTGC CCCTGGTGAC GGCCCTGCTC
GGTGGCGTGC TGCTGCTCTG TCAGGCCTGG CGTCTGCTGC GAGGTCGTCT GATGGCCTGG
CCCGATGTTC AGGGGCCGGA GCTGACCCTG GTCGACATGG CCCTGCTGGT GGCGGGTGGC
TTTGTGGTGA TCAGTGCCGT TGGCGTTCCG CTGGTGGCGT TCCCGTTGGT TGGGGCATTG
ACGGCGGGGC TGGGCAGCCC TCGTCGTGAA GCCGTCAGCG TGGTGATCAA TTACGGCGTG
ATGGCGCTGC CGAGCTTGCT GATCCTCTGG CGGCAAGTGC GTTCGCTGCC GAGGGAGAGG
GCACCGCTGG GGGGGTGGAT GCAGTGGCGT GTGCGGCCGC TGTTCTCCGC TCTACGGGAT
GCAATGACGG GCTGGTTGAT GGTGACGCCG GTGGTGATGC TCACGGGGTG GTTGCTCGTG
CGCCTGGTGG GGGACCCCGG GGGCAGCAAT CCGTTGTTGG AGTTGGTGTT GGGCAGCCGT
GATCCGCTTG CCCTGGGCTT GCTTGCTCTC ACCGCGGTTG TGCTGGCGCC GCTGTTTGAA
GAAACGATCT TCCGCGGTGC CTTGCTGCCG GTGTTGGCGA CCAAGCTCGG TCCCCTCCCG
GGGGTTCTGC TCAGTGGCCT GTTGTTTGCC ATGGCCCACA TCAGTGTTGG CGAGTTGGCA
CCGCTCACGG TGTTGGGGGT TGGGCTTGGT TTGGTGCGGC TCCGCAGCGG ACGCCTGTGG
CCCTCGGTGC TGATGCATGG GCTGTGGAAC GCCGTGACCT TCCTGAACCT GCTGCTGCTC
TGA
|
|---|
| Protein sequence | MPSSPQPVSP RWKGLLAALS LALAGFIWLS GLIDSLSRPS VAPALSLQQQ ELTLLAEPAV
PPPLREALLG EAPREALRKA LEGISAEERT ERQQQMFLLL QGQGSASADL ERGGDDPLLQ
QLQCEAGAAD PTLCIDAAAA GQAAFRLALS TVLPLVTALL GGVLLLCQAW RLLRGRLMAW
PDVQGPELTL VDMALLVAGG FVVISAVGVP LVAFPLVGAL TAGLGSPRRE AVSVVINYGV
MALPSLLILW RQVRSLPRER APLGGWMQWR VRPLFSALRD AMTGWLMVTP VVMLTGWLLV
RLVGDPGGSN PLLELVLGSR DPLALGLLAL TAVVLAPLFE ETIFRGALLP VLATKLGPLP
GVLLSGLLFA MAHISVGELA PLTVLGVGLG LVRLRSGRLW PSVLMHGLWN AVTFLNLLLL
|
|---|
| |