Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0643 |
Symbol | rplS |
ID | 3736069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 620222 |
End bp | 620698 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637775245 |
Product | 50S ribosomal protein L19 |
Protein accession | YP_380972 |
Protein GI | 78212193 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0335] Ribosomal protein L19 |
TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.886918 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGCCG ATTCGAAGGA CACAGCGGTG ACCGACGAGA ACACCGAAAC GGCTGTGGAA GCAGCACCAG AGGCCACAGT GGCGAAGTCC AGCAAGGCTT CAAGTGCTGC TGCCAAGAAA CTGAGCCCCG AAGCTCTGAT TCGCTCCTTT GAGTCGTCTC AGCAGAAGGA TGATCTTCCT GAGATCTATG TGGGTGACAC CGTGCGCGTT GGCGTTCGCA TCAGCGAGGG CAACAAGGAG CGCGTTCAGC CCTACGAGGG CGTGGTGATT TCCAAGCGCC ATGGCGGTCT CAACCAGACC ATCACGGTGC GCCGGATTTT CCAGGGCATC GGCGTTGAGC GGGTGTTCAT GCTGCACAGC CCCCAGGTGG CTTCCATCAA GGTGGAACGG CGCGGTAAAG TGCGTAGGGC GAAGCTTTTC TATCTGCGGG AACGGGTGGG CAAGGCCACC CGCGTGAAGC AGCGCTTCGA TCGCTGA
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Protein sequence | MAADSKDTAV TDENTETAVE AAPEATVAKS SKASSAAAKK LSPEALIRSF ESSQQKDDLP EIYVGDTVRV GVRISEGNKE RVQPYEGVVI SKRHGGLNQT ITVRRIFQGI GVERVFMLHS PQVASIKVER RGKVRRAKLF YLRERVGKAT RVKQRFDR
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