Gene Syncc9605_0643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0643 
SymbolrplS 
ID3736069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp620222 
End bp620698 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content60% 
IMG OID637775245 
Product50S ribosomal protein L19 
Protein accessionYP_380972 
Protein GI78212193 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0335] Ribosomal protein L19 
TIGRFAM ID[TIGR01024] ribosomal protein L19, bacterial type 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.886918 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCCG ATTCGAAGGA CACAGCGGTG ACCGACGAGA ACACCGAAAC GGCTGTGGAA 
GCAGCACCAG AGGCCACAGT GGCGAAGTCC AGCAAGGCTT CAAGTGCTGC TGCCAAGAAA
CTGAGCCCCG AAGCTCTGAT TCGCTCCTTT GAGTCGTCTC AGCAGAAGGA TGATCTTCCT
GAGATCTATG TGGGTGACAC CGTGCGCGTT GGCGTTCGCA TCAGCGAGGG CAACAAGGAG
CGCGTTCAGC CCTACGAGGG CGTGGTGATT TCCAAGCGCC ATGGCGGTCT CAACCAGACC
ATCACGGTGC GCCGGATTTT CCAGGGCATC GGCGTTGAGC GGGTGTTCAT GCTGCACAGC
CCCCAGGTGG CTTCCATCAA GGTGGAACGG CGCGGTAAAG TGCGTAGGGC GAAGCTTTTC
TATCTGCGGG AACGGGTGGG CAAGGCCACC CGCGTGAAGC AGCGCTTCGA TCGCTGA
 
Protein sequence
MAADSKDTAV TDENTETAVE AAPEATVAKS SKASSAAAKK LSPEALIRSF ESSQQKDDLP 
EIYVGDTVRV GVRISEGNKE RVQPYEGVVI SKRHGGLNQT ITVRRIFQGI GVERVFMLHS
PQVASIKVER RGKVRRAKLF YLRERVGKAT RVKQRFDR