Gene Syncc9605_0611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0611 
Symbol 
ID3737063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp591781 
End bp592794 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content61% 
IMG OID637775210 
ProductATPase 
Protein accessionYP_380940 
Protein GI78212161 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID[TIGR01188] daunorubicin resistance ABC transporter ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTTGA TTCAACTGCG GAAGATCTCC AAGGCCTACG GCGCGGTACC GGCCCTGCGT 
GAGCTTGATC TCACCGTTCC GGAAGGGTGC CTTTACGGGC TTCTTGGACC GAATGGTGCC
GGCAAAACAA CGGCCATGCG CATCCTGGCC ACCCTGCTAG CCCCCGACAG CGGCTCAGTT
GTCGTTGGCG GTGTTGACGG TCTGGCCCAG CCACGAGACG TGCGCCAGCT CATGGGCTAT
GTGGCCCAGG AGGTGGCCAT TGACAAGATC CTGAGTGGCC GGGAACTGCT GCAATTGCAA
GGTGATCTCT ATCACTTGCC GCGGAATGAT CGCGATAGCC GCATCGCTGA TCTGATTGAT
CGCCTCGCCA TGGGCGACTG GATTGATCGC CGCTGCGGTA CCTACTCCGG TGGCATGAGG
CGGCGTCTGG ATCTAGCCGC CGGACTGCTG CACCGCCCCC GGTTGCTCGT GCTCGATGAA
CCCACGGTGG GGCTGGATAT CGAGAGCCGC AGTGCCATCT GGCAGCTGCT GCGTCAGCTG
GTTGAAGAGG GCACCACTGT TCTGCTGAGC AGTCACTACC TCGAAGAGGT GGAGGCTCTT
GCGGATCAGA TGGCGATCAT TGATGCCGGT CGTGTGATTG CCGAAGGCAG CCCCGACCAG
CTCAAACAAC GGCTTGGGGG TGATCGCGTG ACTTTGCGAA TCCGAGAGTT CAGCAGTGCC
GATGAGGCGA CCCAGGTGCG TGCCCTTCTC GAACCCTTGG ATGGGGTGCG TCAGGTGGTG
GTGAACCGCT CCCAGGGGTT TTCCCTCAAC CTTGTGATTG AGGGTGGGGC CGTGATCGAT
CAGCTGCGTC AGACCCTCGA GGCTGCAGGT TTGCCTGTGT TTGCCCTGGC CCAGAGTCGT
CCCAGCCTGG ATGATGTCTA CCTTCAAGCC ACAGGACGCA CCCTGATGGA CGCTGAACTG
GCCATCGCAG GCCAGCGCGA CGTCAAACAG GAAAAGCGTC AATCCATGCG TTGA
 
Protein sequence
MALIQLRKIS KAYGAVPALR ELDLTVPEGC LYGLLGPNGA GKTTAMRILA TLLAPDSGSV 
VVGGVDGLAQ PRDVRQLMGY VAQEVAIDKI LSGRELLQLQ GDLYHLPRND RDSRIADLID
RLAMGDWIDR RCGTYSGGMR RRLDLAAGLL HRPRLLVLDE PTVGLDIESR SAIWQLLRQL
VEEGTTVLLS SHYLEEVEAL ADQMAIIDAG RVIAEGSPDQ LKQRLGGDRV TLRIREFSSA
DEATQVRALL EPLDGVRQVV VNRSQGFSLN LVIEGGAVID QLRQTLEAAG LPVFALAQSR
PSLDDVYLQA TGRTLMDAEL AIAGQRDVKQ EKRQSMR