| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0597 |
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| Symbol | |
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| ID | 3737586 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Synechococcus sp. CC9605 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007516 |
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| Strand | + |
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| Start bp | 577798 |
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| End bp | 580497 |
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| Gene Length | 2700 bp |
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| Protein Length | 899 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637775196 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_380926 |
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| Protein GI | 78212147 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.577445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCACA CCCTCGTCAT CGTTGAGAGC CCCACGAAGG CCAAGACCAT CCGTGGCTTC
CTTCCCAAGG GATTCAAGGT CGAAGCCTCC ATGGGGCATG TCCGTGACCT TCCCAACAAC
GCCAGCGAGA TTCCGGCATC AGCCAAGGGG CAGAAATGGG CCAACCTCGG TGTGAACATC
GAAGCGGATT TCGAGCCGCT TTACGTAGTC CCGAAGGACA AGAAGAAAAC GGTTCGCGAA
CTCAAGGACG CCCTCAAGGG TGCTGATCAG TTGCTGTTGG CGACGGACGA AGACCGGGAG
GGTGAAAGCA TCAGTTGGCA TCTGCTCCAG CTGCTGGCGC CGAAGGTGCC GGTGAAGCGC
ATGGTGTTTC ACGAGATCAC CAAGGAGGCC ATCGGCAAGG CCCTGGATCA GACCCGCGAT
CTGGACATGG AGCTGGTCCA TGCCCAGGAA ACCCGGCGCG TTTTGGATCG CCTTGTGGGG
TACACCCTGT CCCCTCTCCT CTGGAAAAAG GTGGCCTGGG GACTCTCCGC CGGGCGGGTG
CAGTCCGTTG CGGTTCGTCT CCTGGTTCAA CGGGAACGGG CCCGCCGCGC CTTCCGCAGC
GGCAGCTACT GGGACCTCAA GGCCCAGCTT GAACAGTCGG GCAGTGCCTT TGAGGCCAAG
CTCACCCATG TGGGTGGCCA GCGAATCGCC ACCGGCAACG ATTTCGACGA GAGCACCGGC
GGGCTGAAGG CGGGCAGTGC TGTGCGGCTG CTCAGCGAGA GCGAGGCCAA GGCGTTGGCT
GAATCCGTGC GATCCAGCGC CTGGACTGTG GATGCGGTGG AGGAGAAGCC CACCGTGCGC
AAGCCGGTGC CTCCCTTCAC CACCAGCACC CTCCAACAGG AGGCGAATCG CAAGCTGCGC
CTCTCAGCCC GGGAAACCAT GCGCTGTGCC CAGGGGCTCT ATGAACGCGG TTTCATCACC
TACATGCGGA CCGACTCGGT TCACTTGTCG GATCAGGCGA TCAACGCATC CCGCAACTGC
GTGGAGACCC TCTACGGCAA GGAGTATCTG AGCAAAGGGC CGCGGCAGTT CAGCACCAAA
GCCCGCAATG CCCAGGAGGC CCATGAAGCG ATTCGTCCAT CGGGCGAAAG CTTCCGAACC
CCCGGTGAGA CCGGACTTGA TGGGCGAGAT CTGGCGGTCT ACGAGCTGAT TTGGAAGCGC
ACCGTGGCCA GCCAGATGGC TGAAGCCAGG CTCACCATGC TGTCGGTAGA TCTCAGCTCA
GGTGAGGCCA GTTTCCGGGC CAGCGGCAAG CGCATCGACT TCCCCGGTTT CTTCCGCGCC
TACGTGGAGG GCAGTGATGA TCCCGACGCG GCCCTCGAGG GTCAGGAAGT GCTGCTGCCG
GCGTTGAGCG TTGGCGATGC ACCGGAGCCG AAGACCGTTG AGCCCCTCGG CCATCAAACC
CAGCCCCCGG CACGCTTCAG TGAGGCATCG CTGGTGAAGA TGCTGGAAAA GGAAGGAATC
GGCCGGCCGT CGACCTACGC CTCGATCATT GGAACGATCG TGGATCGCGG CTACGCCACG
CTGCTGGGTA ATGCCCTGAC CCCCAGCTTC ACCGCCTTTG CGGTGACGGC GCTGCTCGAG
GAGCATTTCC CTGAACTGGT TGACACCAGC TTCACCGCCC GGATGGAGAA CACCCTTGAT
GAGATCTCCC ACGGCAAGGT GCAGTGGCTG CCGTACCTCG AGGGCTTCTA CAAGGGTGAC
GAGGGTCTTG AAAACCAGGT GCAGCAGCGG GAGGGAGACA TCGATCCCGG TGCATCCCGC
ACCATCGATC TGGAGGGCTT GTCCTCCGTG GTTCGTATCG GCCGGTTTGG CGCTTACCTG
GAGGCCAAAC GGGTCAGCGA CGACGGTGAG GAAGAGCTGA TCAAGGCCAC CTTGCCCCGG
GAGATCACTC CGGCTGATCT GGATGAAGAG CAGGCCGAAC TGATTCTCAA ACAGAAGGCC
GACGGCCCCG AAGCCATCGG TGAGGATCCG GAAACGGGGG ATTTGGTCTA CCTGCTCTCC
GGTCAGTACG GCCCTTATGT GCAGCGGGGG CAGGTGAGTG ATGAGAATCC CAAGCCCAAA
CGCGCGTCTC TGCCCAAGGG GCAGAAGCCC GAAGATCTCA CCCTGGAGGA TGCCCTCGGA
CTGCTCCGCT TGCCGCGTCT TCTCGGCGAA CATCCCGAAG GTGGTCGCAT TCAGGCGGGG
CTGGGTCGCT TTGGCCCCTA TGTCGTCTGG GACAAGGGCA AGGGCGATAA GGATTACCGA
TCGCTCAAGG GGGATGACGA TGTTCTGGCG GTGGGGCTGA GCCGAGCCAT CGAGCTGCTG
GCCATGCCCA AACGGGGTCG GGGTGGACGC ACCGCCCTAA AGGATCTCGG TAAGCCGGAG
GGCAGTGATG AAACGATTCA GGTCTATGAC GGCCCCTACG GCCTGTACGT CAAACAGGGC
AAGGTGAATG CCTCCCTGCC GGAAGGCAAG GGTGCTGACG ATGTGACCCT TGAGGAGGCG
GTGGAACTTC TTGTCGCCAA GGCAGCATCG AAGAAGGGCG GTCGTAAAAC CGCTGCGAAA
AAACCGGCGG CCAAGAAGCC AGCTGCCAAA AAACCAGCCG CCAAGAAACC TCCTGCCACC
ACCAAGACCG GTCGGCTCAG GGCCAGTGCG GTGCGGGTGA TCAAGCCGGC TGACAATTGA
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| Protein sequence | MAHTLVIVES PTKAKTIRGF LPKGFKVEAS MGHVRDLPNN ASEIPASAKG QKWANLGVNI
EADFEPLYVV PKDKKKTVRE LKDALKGADQ LLLATDEDRE GESISWHLLQ LLAPKVPVKR
MVFHEITKEA IGKALDQTRD LDMELVHAQE TRRVLDRLVG YTLSPLLWKK VAWGLSAGRV
QSVAVRLLVQ RERARRAFRS GSYWDLKAQL EQSGSAFEAK LTHVGGQRIA TGNDFDESTG
GLKAGSAVRL LSESEAKALA ESVRSSAWTV DAVEEKPTVR KPVPPFTTST LQQEANRKLR
LSARETMRCA QGLYERGFIT YMRTDSVHLS DQAINASRNC VETLYGKEYL SKGPRQFSTK
ARNAQEAHEA IRPSGESFRT PGETGLDGRD LAVYELIWKR TVASQMAEAR LTMLSVDLSS
GEASFRASGK RIDFPGFFRA YVEGSDDPDA ALEGQEVLLP ALSVGDAPEP KTVEPLGHQT
QPPARFSEAS LVKMLEKEGI GRPSTYASII GTIVDRGYAT LLGNALTPSF TAFAVTALLE
EHFPELVDTS FTARMENTLD EISHGKVQWL PYLEGFYKGD EGLENQVQQR EGDIDPGASR
TIDLEGLSSV VRIGRFGAYL EAKRVSDDGE EELIKATLPR EITPADLDEE QAELILKQKA
DGPEAIGEDP ETGDLVYLLS GQYGPYVQRG QVSDENPKPK RASLPKGQKP EDLTLEDALG
LLRLPRLLGE HPEGGRIQAG LGRFGPYVVW DKGKGDKDYR SLKGDDDVLA VGLSRAIELL
AMPKRGRGGR TALKDLGKPE GSDETIQVYD GPYGLYVKQG KVNASLPEGK GADDVTLEEA
VELLVAKAAS KKGGRKTAAK KPAAKKPAAK KPAAKKPPAT TKTGRLRASA VRVIKPADN
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