Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Syncc9605_0564 |
Symbol | |
ID | 3737666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus sp. CC9605 |
Kingdom | Bacteria |
Replicon accession | NC_007516 |
Strand | - |
Start bp | 546860 |
End bp | 549568 |
Gene Length | 2709 bp |
Protein Length | 902 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637775162 |
Product | ATPase-like |
Protein accession | YP_380893 |
Protein GI | 78212114 |
COG category | [R] General function prediction only |
COG ID | [COG3378] Predicted ATPase |
TIGRFAM ID | [TIGR01613] phage/plasmid primase, P4 family, C-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0661178 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.572377 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTACTC CCTGCAAGCA GACTTCTGAA GTTGTCGATG TTCAGGCTTC TATTGTATTA GAAGAAGAGC CTCTCGAACT CACAGACATC GATGAGAAAG AAGCGCAACG GCACTTGGAG GCTGTTGGCT TTGGTGAAGA CGACCCCTGC ATCCTTGCTT GCTATGGCGA CACCTCCCGG TACGTTCCGG CACGTGATCT GAAAAATGAT CTGCCTTACG ACTGGGACCA GGTAGTTGCC AAGTTCAACG GTGATCGTCG CTTCGACTTA GTACGCCACC ACCTTCAAAA TCCGAAGACT CCAAACCTCG GGTTCCTCTC TGCCATTGGT GGCACGAGTA AGCGCCGCGA CACGATCACC GGTGTGGTGT GCATGTCGTA TGAGATCGAT GAGGGTCTCG ATCTTGAGGG TCAAAAGGTT GCTTGGAAGA AAGCGAATCT GCCGACTCCA ACCATTGGTG TCTTCACAGG AAACAAGTCC ATCCACTGGA GTTGGGTCTT CAGAACACCG GTTTCTCTTA CTGCTGCTGA GTTCTGTCGA GAGCGACTGA GCAAAGCGAT TGAAGATGCC AACCCTGGTG TCCAAACCGA TCACAACTTG CACAGCGCTG TTCAGGTACA GCGTCTTGCT GGCTCAGTGC ATCCCAAAAC CGGCCGCAGG GCTGAAATCA TCCACCTGTC ACCTCACACC TATGAGCTAG ATGAGGTGCT GTCGTTCTTG CCTGAACTGG ATGAACCAGT TGATGACGTC ACTGACAGCG GTGGTGACTT CAGGCCAGCA GATGGTCCTG AACCTGATGA CCATGAGCAG TTTCCCGACT TTTCAACCCT GCCCCCGGGT CATCTGATTC AGGCACTTGC TCCAAAGACG CTAGGTCTGT TGAAAGGCTT GGATCCTGAC TCTGATGACC GTTGGCGTAA GTGCTGGCAA CTAAGCAAGC ACCTGCGTGC TGGTCGCCTG CACCTTGAGT CACTCGGTTG CACCGTTGTG GATGCCGACA GCATCGAAAT GACGTTGATG TCGGATTTCA TCCGCGCTAG CGGCATGAAA GGTGGTGATG TCGAAGCAGC TCTTGAAGAG CATTACCGGC CTGAACCTTG CGGCACGTCC GATTACTGCG ACACCTATCT CAAACGGAAG TTGCGGGCGC ACTTTGAACA CGAAGGTTTG TGGCGTCATT CGTATGGCTG GCACAAGCGT TTAGTCCCCG CATCCAATCC AGCCGATTGG ACCGCAAACA TCGATGACTC GTTTTGGACG GTCTGCCGCA TCAAGACCTG CGAGGTGGTC ATTGAGAACG CCATTGGATT GAAAGGCGAT CTGACCAATC AACCGTTGGC CCACAGTCGG GGGCGCTTTG TCCGTTACAA CCCGGACCAG GGCTGTTGGT TGCACGTTTC GCGTGATGCG ATGAAGCGTG AGGTCGCAGA CCTGCTGCTC AAGTGCTTCT CGTACAACAA GGACGAGGAA AAGGTGTTTC GGTTCTCAAC CGCATCACGG GTGAAGTCCT CGATTGAGTG GCTCGAAACC ATGACTGCTG ATGCAGAGAT GGATCAAACC CCCGCCATTG CCTTCGCTAA TGGCACCTAC TTGATCGATA AGGGTGAGCT GGTTCCTCAT AAGCCTGAGT ACCGGCTCAC TTATTCGATC CAAGGTGACT TCATTCCGGA CTGTGTTGAG TGTCCGCCGC ACCTGCATGA CTTCATCGTC AGCAGCTTTG GCGATCACTA CGTCGAACCG GTGCAGCAGT TGCTGCGCTA CATGGTTGAT CCGACGCTGC CTAACCGAAA GATCGTGATG GTCATCGGTC CATCTGGCAG CGGTAAAGGC GTCTTGGAAC GACTGATTGA GAAGTTGTTC CCGCCTAGCT GCGTCAGCTC CATCACCAGC AGCATCAAAG AGATCAACTC ACCGGAAAAG ATCCGGCAGT ACGTCTCGGG TAAGCAACTG GTCGCGTTCC CGGATGTGCA GGGTTTGCAA ACCGGGGTGA CCACCATCTA TTCGATGGTT GATGGCGGCT TGATGGCTCA ACGCAACCTA TTTACCGATG ACACCGAAGG CGTCGTCTTC ACTGGTCGCG TCGTCATTTG CAGCAGCCAA GCGCCTCAGT TTGAGAACGC TGGTAGCGGC ATGGCACGCA GGGCTTTGAT CCTCGAAACT CAGCGACCTG CTGAAAAGCC GGATGCTGAC TTGGATCAGA AGCTTGCTGG TGAACTTGGC TCAATCGTTA GTTGGGCGCT TCAGGCCAAA CACGCTGATG TGAAGCGTGT GCTTGTCAGC GGTAACCAGA CCTTTATCGA CGCTCAACAC AACGTTGAGG CCGACATGGA TGTGGTTCGC CAATTCCTCG ACAACTGCTG TGAGCCCTGC GGGGGCGATT ACATGCCGAA GTTGGGGGTG CTGTACGAAA CGTTCAAGCA ATTCTGCGAG GACTTTGGAT ACACCAAGGT GCTCAACAGG AGGACGCTGC TGACTCGGAT CAAACAGGCG TTACCCAACC TGCACACCCA ACGTCGTTCC GTACCTGGCA CCAACTCAAC CAAGAAGGTG AACCCTCAGT TGTTTGGTTT CCGGATACGC CCAGAGGTTG ATTGCGCTCG GTGGGAGAAA CGCAATTACC GCGAAGGCAA CTGGGCTGCT TTGGTCAGTC ATAAGGCTGA AGCACCTACG CCTGAACAGG TGTTTGAGCA CCAACGGCTA CCCAACTAG
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Protein sequence | MGTPCKQTSE VVDVQASIVL EEEPLELTDI DEKEAQRHLE AVGFGEDDPC ILACYGDTSR YVPARDLKND LPYDWDQVVA KFNGDRRFDL VRHHLQNPKT PNLGFLSAIG GTSKRRDTIT GVVCMSYEID EGLDLEGQKV AWKKANLPTP TIGVFTGNKS IHWSWVFRTP VSLTAAEFCR ERLSKAIEDA NPGVQTDHNL HSAVQVQRLA GSVHPKTGRR AEIIHLSPHT YELDEVLSFL PELDEPVDDV TDSGGDFRPA DGPEPDDHEQ FPDFSTLPPG HLIQALAPKT LGLLKGLDPD SDDRWRKCWQ LSKHLRAGRL HLESLGCTVV DADSIEMTLM SDFIRASGMK GGDVEAALEE HYRPEPCGTS DYCDTYLKRK LRAHFEHEGL WRHSYGWHKR LVPASNPADW TANIDDSFWT VCRIKTCEVV IENAIGLKGD LTNQPLAHSR GRFVRYNPDQ GCWLHVSRDA MKREVADLLL KCFSYNKDEE KVFRFSTASR VKSSIEWLET MTADAEMDQT PAIAFANGTY LIDKGELVPH KPEYRLTYSI QGDFIPDCVE CPPHLHDFIV SSFGDHYVEP VQQLLRYMVD PTLPNRKIVM VIGPSGSGKG VLERLIEKLF PPSCVSSITS SIKEINSPEK IRQYVSGKQL VAFPDVQGLQ TGVTTIYSMV DGGLMAQRNL FTDDTEGVVF TGRVVICSSQ APQFENAGSG MARRALILET QRPAEKPDAD LDQKLAGELG SIVSWALQAK HADVKRVLVS GNQTFIDAQH NVEADMDVVR QFLDNCCEPC GGDYMPKLGV LYETFKQFCE DFGYTKVLNR RTLLTRIKQA LPNLHTQRRS VPGTNSTKKV NPQLFGFRIR PEVDCARWEK RNYREGNWAA LVSHKAEAPT PEQVFEHQRL PN
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