Gene Syncc9605_0541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSyncc9605_0541 
Symbol 
ID3736673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus sp. CC9605 
KingdomBacteria 
Replicon accessionNC_007516 
Strand
Start bp527232 
End bp527771 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content53% 
IMG OID637775139 
Producthypothetical protein 
Protein accessionYP_380870 
Protein GI78212091 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGC CTGGTGTCGT CATCTACGCC GAAGACGTTG TCGCCTGGAA CATGTCCGAC 
AACACGATAC AACGCAGTTA CCACGGCTGG TTTGGCGCCA AGAGCTTTTA TAGCCCTAAC
GAAGACCAGC GCTTCTTCAT CAAGTACATG GGCGACGACG GCACTCGCCA ATTGGTCCAA
GTTGCTTTCC TAAATCACAA GCCCGCTCGA AGCTTCATCA ACATGATGGG CCTCTGGTCT
GGTCTGGAAT CTGAGAACCT CAGAACCACT ATCACTGCAG ACAAGCGAAC AGCTGTAAAA
GACCCAGGCA CTGTCAAACC CTTTGAAGAC GTAACCACCA GCCCTAACGC TCAAAACAAG
GGTGCTCACA ACCTTGGGCA GGGAAGCGTG CCTGCAAAGC GCTACCGCAA AACACCAAAG
CCCCAGCTCA AAGCCTGCTG GTCTGTACAT CTCGAAGCCA ACCCTTCAAT GAAGGTCTGG
GCTGACTCCA ACCCAGAAGC AGCTGAGAAG GTGAAGTCCA AGAAATACGA CGACTGCTGA
 
Protein sequence
MTMPGVVIYA EDVVAWNMSD NTIQRSYHGW FGAKSFYSPN EDQRFFIKYM GDDGTRQLVQ 
VAFLNHKPAR SFINMMGLWS GLESENLRTT ITADKRTAVK DPGTVKPFED VTTSPNAQNK
GAHNLGQGSV PAKRYRKTPK PQLKACWSVH LEANPSMKVW ADSNPEAAEK VKSKKYDDC