| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Syncc9605_0520 |
|---|
| Symbol | |
|---|
| ID | 3736765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Synechococcus sp. CC9605 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007516 |
|---|
| Strand | + |
|---|
| Start bp | 512008 |
|---|
| End bp | 513654 |
|---|
| Gene Length | 1647 bp |
|---|
| Protein Length | 548 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637775118 |
|---|
| Product | acetolactate synthase |
|---|
| Protein accession | YP_380849 |
|---|
| Protein GI | 78212070 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | [TIGR02418] acetolactate synthase, catabolic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.778646 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGGCG CGGAATTCTT GGTGAAGGCC TTAGAAGCCC ATGGTGTCAC CCACGTGTTT
GGTATTCCCG GCGCCAAAGT CGACAGCGTG TTCACGGCTT TGCTGGATTC ACCCATCGAA
CTGGTGCTCT GCCGGCATGA GCAAAACGCG GCGTTTATGG CCCAGGCCTT TGGACGGCTC
ACCGGTCGCA TTGGCGTGTG CCTTGCCACC TCAGGGCCAG GGGTAACCAA CCTGGTCACT
GGACTGGCCA CCGCCACTAC CGAGGGCGAC CCCGTGCTGG CGATCGGAGG TGAGGTGCCC
CTAGACGATC GCTACAAACA CACCCATCAA TCATTAGACG CTGTCGCGCT CATGCGACCG
GTGACTCGCT TCTCACAATC GGCCCTAAAT GCTCACGATC TGCCAGAGGT TTTGGGCAAT
GCGATTCGGG CTGCAGAGAA AGGGCGTCTC GGGGCCGCAT TTTTGGGTTT ACCCAAGGAT
GTCGGCCTCG CCAAGATTGA TGCCGACCCT GCTGCGGGCT GGGGTCAACA AGTTCGTCAA
GGGCCGAGTC ACCCAGAAGA TCTGAAAACA GCTGTAGATA TTCTCAAAGA TTTGCAACGT
CCCTTGCTGT TGCTGGGCAT GCAGGCCTCT GATCCGTGCA TCAGCGAGGC GCTGCAAACT
TATGTGCAGC GAAGTGGCAT TCCATATTGC GCCACATTCC AGGGCCCGGG ATGCTGGGTC
GCTCCGGAGC AGTACGTGGG CAGACTTGGA CTGTTCCGCA ATCAACCTGC CGATGCTCTT
CTAGATGCAG CCGACGGGGT GATCTGCATC GGCTTCGACC CGGTCGAATA TGACCCGAGC
ATCTGGAACA GCGATCAACA GCGTCCGATT GTCAATGTAG ATGTGCAGCC TGCGGATCAG
GACAGGGCTT TTCTGCCCCG GGTGGAACTG ATTGGTGATC TCCAGCAAAC CCTCATCGCT
TTGGCCACGT TGCCCAAGAT GAGTGTTTCA GATGACTTCC TACAGCTGGA ACAAGCCTAC
GCATCTGAAC TTCAGGCAAC AGCCGCAGAA GGCCTCTCTA TGGGAGGTGC TGCTCCCGTG
CATCCATTGC GATTGGTACA CGAAATCAGC ATTGTGACAA CAGAGGACAC AACGCTATGC
CTTGATGTGG GCTCCCACTA CATCTGGATG AACCGCTATG CACAGGCCGA GCGGGCCCGT
CAGGTACTGG TCAGCAATGG ACAGCAGACC CTGGGGGTTG CTCTTCCCTG GGCGATTGCA
GCTGGCATGG TGAGGCATGG CTCGCCAGTG ATCTCCGTGT CGGGCGACGG GGGCTTTCTG
TTCACTGCAA CCGAACTGGA AACGGCCATG CGCATGGGCA GCCGCTTTGT GCACGTGATC
TGGAACAGTA ATTCGTACAA CATGGTGGAG TTCCAGGAGC AAGCCCACTA CGGGAGGGTC
TCCGGCATCC ACCTGGGTGA CTACGACGTG GTCAAATTTG CGGAATCCTT TGGCGCGAAG
GGCTATACGA TTAATCATGC CGACGAGCTC GGCCCCGTGC TTAGGGATGC CCTGAAGCAA
CCGGTGCCAG CCTTGATCAA CGTGCCGGTG GATTACACCG ACAACATTCA GCTGATGCAA
AATGTCCATC AAGAATTCAT TCATTAA
|
|---|
| Protein sequence | MNGAEFLVKA LEAHGVTHVF GIPGAKVDSV FTALLDSPIE LVLCRHEQNA AFMAQAFGRL
TGRIGVCLAT SGPGVTNLVT GLATATTEGD PVLAIGGEVP LDDRYKHTHQ SLDAVALMRP
VTRFSQSALN AHDLPEVLGN AIRAAEKGRL GAAFLGLPKD VGLAKIDADP AAGWGQQVRQ
GPSHPEDLKT AVDILKDLQR PLLLLGMQAS DPCISEALQT YVQRSGIPYC ATFQGPGCWV
APEQYVGRLG LFRNQPADAL LDAADGVICI GFDPVEYDPS IWNSDQQRPI VNVDVQPADQ
DRAFLPRVEL IGDLQQTLIA LATLPKMSVS DDFLQLEQAY ASELQATAAE GLSMGGAAPV
HPLRLVHEIS IVTTEDTTLC LDVGSHYIWM NRYAQAERAR QVLVSNGQQT LGVALPWAIA
AGMVRHGSPV ISVSGDGGFL FTATELETAM RMGSRFVHVI WNSNSYNMVE FQEQAHYGRV
SGIHLGDYDV VKFAESFGAK GYTINHADEL GPVLRDALKQ PVPALINVPV DYTDNIQLMQ
NVHQEFIH
|
|---|
| |